3str: Difference between revisions

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[[Image:3str.jpg|left|200px]]


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==Strep Peptide Deformylase with a time dependent thiazolidine hydroxamic acid==
The line below this paragraph, containing "STRUCTURE_3str", creates the "Structure Box" on the page.
<StructureSection load='3str' size='340' side='right'caption='[[3str]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3str]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3STR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3STR FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3LI:(4R)-3-(4-[4-(2-CHLOROPHENYL)PIPERAZIN-1-YL]-6-{[2-METHYL-6-(METHYLCARBAMOYL)PHENYL]AMINO}-1,3,5-TRIAZIN-2-YL)-N-[2-(HYDROXYAMINO)-2-OXOETHYL]-1,3-THIAZOLIDINE-4-CARBOXAMIDE'>3LI</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_3str|  PDB=3str  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3str FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3str OCA], [https://pdbe.org/3str PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3str RCSB], [https://www.ebi.ac.uk/pdbsum/3str PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3str ProSAT]</span></td></tr>
 
</table>
===Strep Peptide Deformylase with a time dependent thiazolidine hydroxamic acid===
== Function ==
 
[https://www.uniprot.org/uniprot/Q939R9_STREE Q939R9_STREE] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (By similarity).[HAMAP-Rule:MF_00163]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_21711014}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 21711014 is the PubMed ID number.
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{{ABSTRACT_PUBMED_21711014}}
 
==About this Structure==
[[3str]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3STR OCA].  
 
==Reference==
<ref group="xtra">PMID:021711014</ref><references group="xtra"/>
[[Category: Peptide deformylase]]
[[Category: Streptococcus pneumoniae]]
[[Category: Streptococcus pneumoniae]]
[[Category: Campobasso, N.]]
[[Category: Campobasso N]]
[[Category: Ward, P.]]
[[Category: Ward P]]
[[Category: Alpha-beta fold]]
[[Category: Hydrolase activity]]
[[Category: Hydrolase-hydrolase inhibitor complex]]
[[Category: Metal ion binding]]
[[Category: Peptide deformylase activity]]
Retrieved from "https://proteopedia.org/3str"