2nyx: Difference between revisions

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New page: left|200px<br /><applet load="2nyx" size="350" color="white" frame="true" align="right" spinBox="true" caption="2nyx, resolution 2.300Å" /> '''Crystal structure o...
 
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[[Image:2nyx.gif|left|200px]]<br /><applet load="2nyx" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2nyx, resolution 2.300&Aring;" />
'''Crystal structure of RV1404 from Mycobacterium tuberculosis'''<br />


==About this Structure==
==Crystal structure of RV1404 from Mycobacterium tuberculosis==
2NYX is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NYX OCA].  
<StructureSection load='2nyx' size='340' side='right'caption='[[2nyx]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
[[Category: Mycobacterium tuberculosis]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2nyx]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis_H37Rv Mycobacterium tuberculosis H37Rv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NYX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NYX FirstGlance]. <br>
[[Category: Bursey, E.H.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
[[Category: Hung, L.W.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: ISFI, Integrated.Center.for.Structure.and.Function.Innovation.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nyx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nyx OCA], [https://pdbe.org/2nyx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nyx RCSB], [https://www.ebi.ac.uk/pdbsum/2nyx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nyx ProSAT], [https://www.topsan.org/Proteins/ISFI/2nyx TOPSAN]</span></td></tr>
[[Category: Kaviratne, T.]]
</table>
[[Category: Kim, C.Y.]]
== Function ==
[[Category: Lekin, T.]]
[https://www.uniprot.org/uniprot/P71672_MYCTU P71672_MYCTU]  
[[Category: Radhakannan, R.]]
== Evolutionary Conservation ==
[[Category: Segelke, B.W.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: TBSGC, TB.Structural.Genomics.Consortium.]]
Check<jmol>
[[Category: Terwilliger, T.C.]]
  <jmolCheckbox>
[[Category: Toppani, D.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ny/2nyx_consurf.spt"</scriptWhenChecked>
[[Category: Woodruff, T.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Yu, M.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: alpha/beta]]
  </jmolCheckbox>
[[Category: integrated center for structure and function innovation]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nyx ConSurf].
[[Category: isfi]]
<div style="clear:both"></div>
[[Category: protein structure initiative]]
__TOC__
[[Category: psi-2]]
</StructureSection>
[[Category: structural genomics]]
[[Category: Large Structures]]
[[Category: tb structural genomics consortium]]
[[Category: Mycobacterium tuberculosis H37Rv]]
[[Category: tbsgc]]
[[Category: Bursey EH]]
 
[[Category: Hung L-W]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 21:02:08 2008''
[[Category: Kaviratne T]]
[[Category: Kim C-Y]]
[[Category: Lekin T]]
[[Category: Radhakannan R]]
[[Category: Segelke BW]]
[[Category: Terwilliger TC]]
[[Category: Toppani D]]
[[Category: Woodruff T]]
[[Category: Yu M]]

Latest revision as of 00:11, 28 December 2023

Crystal structure of RV1404 from Mycobacterium tuberculosis

2nyx, resolution 2.30Å

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