2o4d: Difference between revisions
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New page: left|200px<br /><applet load="2o4d" size="350" color="white" frame="true" align="right" spinBox="true" caption="2o4d, resolution 1.850Å" /> '''Crystal Structure o... |
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== | ==Crystal Structure of a hypothetical protein from Pseudomonas aeruginosa== | ||
<StructureSection load='2o4d' size='340' side='right'caption='[[2o4d]], [[Resolution|resolution]] 1.85Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2o4d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O4D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O4D FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o4d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o4d OCA], [https://pdbe.org/2o4d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o4d RCSB], [https://www.ebi.ac.uk/pdbsum/2o4d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o4d ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/Q9I6M1_PSEAE Q9I6M1_PSEAE] Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity.[SAAS:SAAS00088543] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o4/2o4d_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o4d ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Pseudomonas aeruginosa]] | [[Category: Pseudomonas aeruginosa]] | ||
[[Category: Battaile K]] | |||
[[Category: Battaile | [[Category: Chirgadze NY]] | ||
[[Category: Chirgadze | [[Category: Edwards AM]] | ||
[[Category: Edwards | [[Category: Kimber M]] | ||
[[Category: Kimber | [[Category: Kisselman G]] | ||
[[Category: Kisselman | [[Category: McGrath TE]] | ||
[[Category: McGrath | [[Category: Ng I]] | ||
[[Category: Ng | [[Category: Pai EF]] | ||
[[Category: Pai | [[Category: Romanov V]] | ||
[[Category: Romanov | [[Category: Virag C]] | ||
[[Category: Virag | [[Category: Wu-Brown J]] | ||
[[Category: Wu-Brown | |||
