2obb: Difference between revisions

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New page: left|200px<br /><applet load="2obb" size="350" color="white" frame="true" align="right" spinBox="true" caption="2obb, resolution 2.20Å" /> '''Structure of the con...
 
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[[Image:2obb.gif|left|200px]]<br /><applet load="2obb" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2obb, resolution 2.20&Aring;" />
'''Structure of the conserved protein coded by locus BT_0820 from Bacteroides thetaiotaomicron'''<br />


==About this Structure==
==Structure of the conserved protein coded by locus BT_0820 from Bacteroides thetaiotaomicron==
2OBB is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron] with <scene name='pdbligand=MG:'>MG</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OBB OCA].  
<StructureSection load='2obb' size='340' side='right'caption='[[2obb]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
[[Category: Bacteroides thetaiotaomicron]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2obb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_VPI-5482 Bacteroides thetaiotaomicron VPI-5482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OBB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OBB FirstGlance]. <br>
[[Category: Abdullah, J.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
[[Category: Bigelow, L.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Cuff, M.E.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2obb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2obb OCA], [https://pdbe.org/2obb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2obb RCSB], [https://www.ebi.ac.uk/pdbsum/2obb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2obb ProSAT], [https://www.topsan.org/Proteins/MCSG/2obb TOPSAN]</span></td></tr>
[[Category: Joachimiak, A.]]
</table>
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
== Function ==
[[Category: MG]]
[https://www.uniprot.org/uniprot/Q8A9J5_BACTN Q8A9J5_BACTN]  
[[Category: bacteroides thetaiotaomicron]]
== Evolutionary Conservation ==
[[Category: mcsg]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: midwest center for structural genomics]]
Check<jmol>
[[Category: protein structure initiative]]
  <jmolCheckbox>
[[Category: psi-2]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ob/2obb_consurf.spt"</scriptWhenChecked>
[[Category: structural genomics]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 21:08:23 2008''
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2obb ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bacteroides thetaiotaomicron VPI-5482]]
[[Category: Large Structures]]
[[Category: Abdullah J]]
[[Category: Bigelow L]]
[[Category: Cuff ME]]
[[Category: Joachimiak A]]
Retrieved from "https://proteopedia.org/2obb"