2oo3: Difference between revisions

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New page: left|200px<br /><applet load="2oo3" size="350" color="white" frame="true" align="right" spinBox="true" caption="2oo3, resolution 2.00Å" /> '''Crystal structure of...
 
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[[Image:2oo3.gif|left|200px]]<br /><applet load="2oo3" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2oo3, resolution 2.00&Aring;" />
'''Crystal structure of protein LPL1258 from Legionella pneumophila str. Philadelphia 1, Pfam DUF519'''<br />


==About this Structure==
==Crystal structure of protein LPL1258 from Legionella pneumophila str. Philadelphia 1, Pfam DUF519==
2OO3 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Legionella_pneumophila_subsp._pneumophila Legionella pneumophila subsp. pneumophila] with <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OO3 OCA].  
<StructureSection load='2oo3' size='340' side='right'caption='[[2oo3]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2oo3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Legionella_pneumophila_subsp._pneumophila Legionella pneumophila subsp. pneumophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OO3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OO3 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oo3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oo3 OCA], [https://pdbe.org/2oo3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oo3 RCSB], [https://www.ebi.ac.uk/pdbsum/2oo3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oo3 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2oo3 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5ZVZ2_LEGPH Q5ZVZ2_LEGPH] Specifically methylates the adenine in position 2030 of 23S rRNA.[HAMAP-Rule:MF_00934]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oo/2oo3_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2oo3 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Legionella pneumophila subsp. pneumophila]]
[[Category: Legionella pneumophila subsp. pneumophila]]
[[Category: Single protein]]
[[Category: Almo SC]]
[[Category: Almo, S.C.]]
[[Category: Atwell S]]
[[Category: Atwell, S.]]
[[Category: Bain KT]]
[[Category: Bain, K.T.]]
[[Category: Bonanno JB]]
[[Category: Bonanno, J.B.]]
[[Category: Burley SK]]
[[Category: Burley, S.K.]]
[[Category: Freeman J]]
[[Category: Freeman, J.]]
[[Category: Ozyurt S]]
[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
[[Category: Reyes C]]
[[Category: Ozyurt, S.]]
[[Category: Sauder JM]]
[[Category: Reyes, C.]]
[[Category: Slocombe A]]
[[Category: Sauder, M.J.]]
[[Category: Smyth L]]
[[Category: Slocombe, A.]]
[[Category: Smyth, L.]]
[[Category: SO4]]
[[Category: new york structural genomix research consortium]]
[[Category: nysgxrc]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomics]]
[[Category: unknown function]]
 
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Retrieved from "https://proteopedia.org/2oo3"