3p1y: Difference between revisions

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[[Image:3p1y.jpg|left|200px]]


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==Crystal structure of the chimeric Archaeoglobus fulgidus RNA splicing endonuclease with the broadest substrate specificity==
The line below this paragraph, containing "STRUCTURE_3p1y", creates the "Structure Box" on the page.
<StructureSection load='3p1y' size='340' side='right'caption='[[3p1y]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3p1y]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeropyrum_pernix Aeropyrum pernix] and [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3P1Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3P1Y FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3p1y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3p1y OCA], [https://pdbe.org/3p1y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3p1y RCSB], [https://www.ebi.ac.uk/pdbsum/3p1y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3p1y ProSAT]</span></td></tr>
{{STRUCTURE_3p1y|  PDB=3p1y  |  SCENE=  }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/ENDA_ARCFU ENDA_ARCFU] Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp.[https://www.uniprot.org/uniprot/ENDA_AERPE ENDA_AERPE] Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp (By similarity).


===Crystal structure of the chimeric Archaeoglobus fulgidus RNA splicing endonuclease with the broadest substrate specificity===
==See Also==
 
*[[Endonuclease 3D structures|Endonuclease 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
[[3p1y]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus,_aeropyrum_pernix,_archaeoglobus_fulgidus Archaeoglobus fulgidus, aeropyrum pernix, archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3P1Y OCA].
[[Category: Aeropyrum pernix]]
[[Category: Archaeoglobus fulgidus, aeropyrum pernix, archaeoglobus fulgidus]]
[[Category: Archaeoglobus fulgidus]]
[[Category: TRNA-intron endonuclease]]
[[Category: Large Structures]]
[[Category: Hirata, A.]]
[[Category: Hirata A]]
[[Category: Broad substrate specificity]]
[[Category: Hydrolase]]
[[Category: Protein homodimer]]
[[Category: Rna splicing endonuclease]]
Retrieved from "https://proteopedia.org/3p1y"