2pb9: Difference between revisions

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New page: left|200px<br /><applet load="2pb9" size="350" color="white" frame="true" align="right" spinBox="true" caption="2pb9, resolution 2.7Å" /> '''Crystal structure of ...
 
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[[Image:2pb9.gif|left|200px]]<br /><applet load="2pb9" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2pb9, resolution 2.7&Aring;" />
'''Crystal structure of C-terminal domain of phosphomethylpyrimidine kinase'''<br />


==About this Structure==
==Crystal structure of C-terminal domain of phosphomethylpyrimidine kinase==
2PB9 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus] with <scene name='pdbligand=PO4:'>PO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PB9 OCA].
<StructureSection load='2pb9' size='340' side='right'caption='[[2pb9]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
[[Category: Pyrococcus furiosus]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PB9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PB9 FirstGlance]. <br>
[[Category: Burley, S.K.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
[[Category: Eswaramoorthy, S.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pb9 OCA], [https://pdbe.org/2pb9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pb9 RCSB], [https://www.ebi.ac.uk/pdbsum/2pb9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pb9 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2pb9 TOPSAN]</span></td></tr>
[[Category: Swaminathan, S.]]
</table>
[[Category: PO4]]
== Evolutionary Conservation ==
[[Category: 10417c]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: new york structural genomix research consortium]]
Check<jmol>
[[Category: nysgxrc]]
  <jmolCheckbox>
[[Category: phosphate]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pb/2pb9_consurf.spt"</scriptWhenChecked>
[[Category: protein structure initiative]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: psi2]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: structural genomics]]
  </jmolCheckbox>
 
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pb9 ConSurf].
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 21:21:57 2008''
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Burley SK]]
[[Category: Eswaramoorthy S]]
[[Category: Swaminathan S]]

Latest revision as of 08:28, 30 October 2024

Crystal structure of C-terminal domain of phosphomethylpyrimidine kinase

2pb9, resolution 2.70Å

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