3rdr: Difference between revisions

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[[Image:3rdr.png|left|200px]]


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==Structure of the catalytic domain of XlyA==
The line below this paragraph, containing "STRUCTURE_3rdr", creates the "Structure Box" on the page.
<StructureSection load='3rdr' size='340' side='right'caption='[[3rdr]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3rdr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3hma 3hma]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RDR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RDR FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3rdr|  PDB=3rdr  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rdr OCA], [https://pdbe.org/3rdr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rdr RCSB], [https://www.ebi.ac.uk/pdbsum/3rdr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rdr ProSAT]</span></td></tr>
 
</table>
===Structure of the catalytic domain of XlyA===
== Function ==
 
[https://www.uniprot.org/uniprot/XLYA_BACSU XLYA_BACSU] Autolysins are involved in some important biological processes such as cell separation, cell-wall turnover, competence for genetic transformation, formation of the flagella and sporulation.
 
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</StructureSection>
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(as it appears on PubMed at http://www.pubmed.gov), where 21816821 is the PubMed ID number.
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{{ABSTRACT_PUBMED_21816821}}
 
==About this Structure==
[[3rdr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RDR OCA].  
 
==Reference==
<ref group="xtra">PMID:021816821</ref><references group="xtra"/>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: N-acetylmuramoyl-L-alanine amidase]]
[[Category: Large Structures]]
[[Category: Liddington, R C.]]
[[Category: Liddington RC]]
[[Category: Low, L Y.]]
[[Category: Low LY]]
[[Category: Amidase]]
[[Category: Hydrolase]]
[[Category: T7 lysozyme fold]]
Retrieved from "https://proteopedia.org/3rdr"