2vkp: Difference between revisions

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[[Image:2vkp.png|left|200px]]


<!--
==Crystal structure of BTB domain from BTBD6==
The line below this paragraph, containing "STRUCTURE_2vkp", creates the "Structure Box" on the page.
<StructureSection load='2vkp' size='340' side='right'caption='[[2vkp]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2vkp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VKP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VKP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2vkp|  PDB=2vkp  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vkp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vkp OCA], [https://pdbe.org/2vkp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vkp RCSB], [https://www.ebi.ac.uk/pdbsum/2vkp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vkp ProSAT]</span></td></tr>
 
</table>
===CRYSTAL STRUCTURE OF BTB DOMAIN FROM BTBD6===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
[[2vkp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VKP OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vk/2vkp_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vkp ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Arrowsmith, C H.]]
[[Category: Large Structures]]
[[Category: Bunkoczi, G.]]
[[Category: Arrowsmith CH]]
[[Category: Cooper, C D.O.]]
[[Category: Bunkoczi G]]
[[Category: Delft, F Von.]]
[[Category: Cooper CDO]]
[[Category: Edwards, A.]]
[[Category: Edwards A]]
[[Category: Elkins, J M.]]
[[Category: Elkins JM]]
[[Category: Filippakopoulos, P.]]
[[Category: Filippakopoulos P]]
[[Category: Gileadi, O.]]
[[Category: Gileadi O]]
[[Category: Knapp, S.]]
[[Category: Knapp S]]
[[Category: Pike, A C.W.]]
[[Category: Pike ACW]]
[[Category: Salah, E.]]
[[Category: Salah E]]
[[Category: Weigelt, J.]]
[[Category: Weigelt J]]
[[Category: Protein-binding]]
[[Category: Von Delft F]]
Retrieved from "https://proteopedia.org/2vkp"