3sqf: Difference between revisions

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[[Image:3sqf.jpg|left|200px]]


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==Crystal structure of monomeric M-PMV retroviral protease==
The line below this paragraph, containing "STRUCTURE_3sqf", creates the "Structure Box" on the page.
<StructureSection load='3sqf' size='340' side='right'caption='[[3sqf]], [[Resolution|resolution]] 1.63&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3sqf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mason-Pfizer_monkey_virus Mason-Pfizer monkey virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SQF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SQF FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6324&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sqf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sqf OCA], [https://pdbe.org/3sqf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sqf RCSB], [https://www.ebi.ac.uk/pdbsum/3sqf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sqf ProSAT]</span></td></tr>
{{STRUCTURE_3sqf|  PDB=3sqf  |  SCENE=  }}
</table>
 
== Function ==
===Crystal structure of monomeric M-PMV retroviral protease===
[https://www.uniprot.org/uniprot/PRO_MPMV PRO_MPMV] Matrix protein.  Nucleocapsid protein p14: Nucleocapsid protein.  Capsid protein.  The aspartyl protease mediates proteolytic cleavages of Gag and Gag-Pol polyproteins during or shortly after the release of the virion from the plasma membrane. Cleavages take place as an ordered, step-wise cascade to yield mature proteins. This process is called maturation. Displays maximal activity during the budding process just prior to particle release from the cell.[PROSITE-ProRule:PRU00275]<ref>PMID:9636364</ref>   The aspartyl protease mediates proteolytic cleavages of Gag and Gag-Pol polyproteins during or shortly after the release of the virion from the plasma membrane. Cleavages take place as an ordered, step-wise cascade to yield mature proteins. This process is called maturation. Displays maximal activity during the budding process just prior to particle release from the cell.[PROSITE-ProRule:PRU00275]<ref>PMID:9636364</ref>   Enhances the activity of the reverse transcriptase. May be part of the mature RT.<ref>PMID:22171253</ref>  
 
== References ==
 
<references/>
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The line below this paragraph, {{ABSTRACT_PUBMED_9636364}}, adds the Publication Abstract to the page
</StructureSection>
(as it appears on PubMed at http://www.pubmed.gov), where 9636364 is the PubMed ID number.
[[Category: Large Structures]]
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[[Category: Mason-Pfizer monkey virus]]
{{ABSTRACT_PUBMED_9636364}}
[[Category: Baker D]]
 
[[Category: Cooper S]]
==About this Structure==
[[Category: DiMaio F]]
[[3sqf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mason-pfizer_monkey_virus Mason-pfizer monkey virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SQF OCA].  
[[Category: Gilski M]]
 
[[Category: Group Foldit Contenders]]
==Reference==
[[Category: Jaskolski M]]
<ref group="xtra">PMID:009636364</ref><ref group="xtra">PMID:014568536</ref><ref group="xtra">PMID:002536902</ref><ref group="xtra">PMID:002548279</ref><references group="xtra"/>
[[Category: Kazmierczyk M]]
[[Category: Mason-pfizer monkey virus]]
[[Category: Khatib F]]
[[Category: Baker, D.]]
[[Category: Krzywda S]]
[[Category: Cooper, S.]]
[[Category: Pichova I]]
[[Category: DiMaio, F.]]
[[Category: Popovic Z]]
[[Category: Gilski, M.]]
[[Category: Thompson J]]
[[Category: Group, Foldit Contenders]]
[[Category: Zabranska H]]
[[Category: Jaskolski, M.]]
[[Category: Kazmierczyk, M.]]
[[Category: Khatib, F.]]
[[Category: Krzywda, S.]]
[[Category: Pichova, I.]]
[[Category: Popovic, Z.]]
[[Category: Thompson, J.]]
[[Category: Zabranska, H.]]
[[Category: Aspartic protease]]
[[Category: D-type retrovirus]]
[[Category: Folded monomer]]
[[Category: Hydrolase]]
[[Category: Retropepsin]]
[[Category: Retroviral protease]]
[[Category: Retroviral protease folded as a monomer]]
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