1ynb: Difference between revisions

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[[Image:1ynb.png|left|200px]]


<!--
==crystal structure of genomics APC5600==
The line below this paragraph, containing "STRUCTURE_1ynb", creates the "Structure Box" on the page.
<StructureSection load='1ynb' size='340' side='right'caption='[[1ynb]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1ynb]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YNB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YNB FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.76&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ynb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ynb OCA], [https://pdbe.org/1ynb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ynb RCSB], [https://www.ebi.ac.uk/pdbsum/1ynb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ynb ProSAT], [https://www.topsan.org/Proteins/MCSG/1ynb TOPSAN]</span></td></tr>
{{STRUCTURE_1ynb|  PDB=1ynb  |  SCENE=  }}
</table>
 
== Function ==
===crystal structure of genomics APC5600===
[https://www.uniprot.org/uniprot/O28840_ARCFU O28840_ARCFU]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
[[1ynb]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YNB OCA].  
  <jmolCheckbox>
[[Category: Archaeoglobus fulgidus]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yn/1ynb_consurf.spt"</scriptWhenChecked>
[[Category: Dong, A.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Edwards, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Joachimiak, A.]]
  </jmolCheckbox>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ynb ConSurf].
[[Category: Pai, E F.]]
<div style="clear:both"></div>
[[Category: Savchenko, A.]]
__TOC__
[[Category: Skarina, T.]]
</StructureSection>
[[Category: Hydrolase]]
[[Category: Archaeoglobus fulgidus DSM 4304]]
[[Category: Mcsg]]
[[Category: Large Structures]]
[[Category: Midwest center for structural genomic]]
[[Category: Dong A]]
[[Category: Protein structure initiative]]
[[Category: Edwards A]]
[[Category: Psi]]
[[Category: Joachimiak A]]
[[Category: Structural genomic]]
[[Category: Pai EF]]
[[Category: Sulfur sad]]
[[Category: Savchenko A]]
[[Category: Skarina T]]
Retrieved from "https://proteopedia.org/1ynb"