3td3: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3td3.png|left|200px]]


<!--
==Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with glycine==
The line below this paragraph, containing "STRUCTURE_3td3", creates the "Structure Box" on the page.
<StructureSection load='3td3' size='340' side='right'caption='[[3td3]], [[Resolution|resolution]] 1.59&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3td3]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baumannii Acinetobacter baumannii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TD3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TD3 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.59&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLY:GLYCINE'>GLY</scene></td></tr>
{{STRUCTURE_3td3|  PDB=3td3  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3td3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3td3 OCA], [https://pdbe.org/3td3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3td3 RCSB], [https://www.ebi.ac.uk/pdbsum/3td3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3td3 ProSAT]</span></td></tr>
 
</table>
===Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with glycine===
== Function ==
 
[https://www.uniprot.org/uniprot/OMP38_ACIB2 OMP38_ACIB2] Functions as a porin (PubMed:9928952). Induces apoptosis in human cell lines through caspase-dependent and AIF-dependent pathways. Purified Omp38 enters host cell and localizes to the mitochondria, which presumably leads to a release of proapoptotic molecules such as cytochrome c and AIF (apoptosis-inducing factor) (PubMed:16008580). Binds peptidoglycan, contributes to cell wall maintenance (Probable).<ref>PMID:16008580</ref> <ref>PMID:9928952</ref> <ref>PMID:16008580</ref> <ref>PMID:21965596</ref>  
 
== References ==
<!--
<references/>
The line below this paragraph, {{ABSTRACT_PUBMED_21965596}}, adds the Publication Abstract to the page
__TOC__
(as it appears on PubMed at http://www.pubmed.gov), where 21965596 is the PubMed ID number.
</StructureSection>
-->
{{ABSTRACT_PUBMED_21965596}}
 
==About this Structure==
[[3td3]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Acinetobacter_baumannii Acinetobacter baumannii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TD3 OCA].  
 
==Reference==
<ref group="xtra">PMID:021965596</ref><references group="xtra"/>
[[Category: Acinetobacter baumannii]]
[[Category: Acinetobacter baumannii]]
[[Category: Kim, H Y.]]
[[Category: Large Structures]]
[[Category: Lee, W C.]]
[[Category: Kim HY]]
[[Category: Park, J S.]]
[[Category: Lee WC]]
[[Category: Song, J H.]]
[[Category: Park JS]]
[[Category: Cell-wall attachment]]
[[Category: Song JH]]
[[Category: Membrane protein]]
[[Category: Ompa-like fold]]
[[Category: Peptide binding protein]]
[[Category: Peptidoglycan-binding]]
Retrieved from "https://proteopedia.org/3td3"