3si6: Difference between revisions

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[[Image:3si6.png|left|200px]]


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==RB69 DNA Polymerase Triple Mutant (L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-terminated Primer in the presence of Mg2+==
The line below this paragraph, containing "STRUCTURE_3si6", creates the "Structure Box" on the page.
<StructureSection load='3si6' size='340' side='right'caption='[[3si6]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3si6]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_phage_RB69 Escherichia phage RB69]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SI6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SI6 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DUP:2-DEOXYURIDINE+5-ALPHA,BETA-IMIDO-TRIPHOSPHATE'>DUP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_3si6|  PDB=3si6  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3si6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3si6 OCA], [https://pdbe.org/3si6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3si6 RCSB], [https://www.ebi.ac.uk/pdbsum/3si6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3si6 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/DPOL_BPR69 DPOL_BPR69] This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single stranded DNA in the 3'- to 5'-direction.


===RB69 DNA Polymerase Triple Mutant (L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-terminated Primer in the presence of Mg2+===
==See Also==
 
*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_21923197}}, adds the Publication Abstract to the page
[[Category: Escherichia phage RB69]]
(as it appears on PubMed at http://www.pubmed.gov), where 21923197 is the PubMed ID number.
[[Category: Large Structures]]
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[[Category: Konigsberg WH]]
{{ABSTRACT_PUBMED_21923197}}
[[Category: Wang J]]
 
[[Category: Wang M]]
==About this Structure==
[[3si6]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_rb69 Enterobacteria phage rb69]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SI6 OCA].
 
==Reference==
<ref group="xtra">PMID:021923197</ref><references group="xtra"/>
[[Category: DNA-directed DNA polymerase]]
[[Category: Enterobacteria phage rb69]]
[[Category: Konigsberg, W H.]]
[[Category: Wang, J.]]
[[Category: Wang, M.]]
[[Category: Dna binding]]
[[Category: Transferase-dna complex]]

Latest revision as of 12:57, 14 March 2024

RB69 DNA Polymerase Triple Mutant (L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-terminated Primer in the presence of Mg2+

3si6, resolution 1.85Å

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