3lhl: Difference between revisions

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[[Image:3lhl.png|left|200px]]


<!--
==Crystal structure of a putative agmatinase from Clostridium difficile==
The line below this paragraph, containing "STRUCTURE_3lhl", creates the "Structure Box" on the page.
<StructureSection load='3lhl' size='340' side='right'caption='[[3lhl]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3lhl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridioides_difficile_630 Clostridioides difficile 630]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LHL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LHL FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
{{STRUCTURE_3lhl|  PDB=3lhl  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lhl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lhl OCA], [https://pdbe.org/3lhl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lhl RCSB], [https://www.ebi.ac.uk/pdbsum/3lhl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lhl ProSAT]</span></td></tr>
 
</table>
===Crystal structure of a putative agmatinase from Clostridium difficile===
== Function ==
 
[https://www.uniprot.org/uniprot/Q18A84_CLOD6 Q18A84_CLOD6]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
[[3lhl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_difficile Clostridium difficile]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LHL OCA].  
Check<jmol>
[[Category: Clostridium difficile]]
  <jmolCheckbox>
[[Category: Burley, S K.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lh/3lhl_consurf.spt"</scriptWhenChecked>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Palani, K.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Swaminathan, S.]]
  </jmolCheckbox>
[[Category: 11305e]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lhl ConSurf].
[[Category: Agmatinase]]
<div style="clear:both"></div>
[[Category: Hydrolase]]
__TOC__
[[Category: Manganese]]
</StructureSection>
[[Category: Metal-binding]]
[[Category: Clostridioides difficile 630]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Large Structures]]
[[Category: Nysgxrc]]
[[Category: Burley SK]]
[[Category: Structural genomic]]
[[Category: Palani K]]
[[Category: Swaminathan S]]

Latest revision as of 05:58, 17 October 2024

Crystal structure of a putative agmatinase from Clostridium difficile

3lhl, resolution 2.30Å

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