3lmc: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
m Protected "3lmc" [edit=sysop:move=sysop]
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3lmc.png|left|200px]]


<!--
==Crystal Structure of zinc-dependent peptidase from Methanocorpusculum labreanum (strain Z), Northeast Structural Genomics Consortium Target MuR16==
The line below this paragraph, containing "STRUCTURE_3lmc", creates the "Structure Box" on the page.
<StructureSection load='3lmc' size='340' side='right'caption='[[3lmc]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3lmc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocorpusculum_labreanum_Z Methanocorpusculum labreanum Z]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LMC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LMC FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.997&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3lmc|  PDB=3lmc  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lmc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lmc OCA], [https://pdbe.org/3lmc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lmc RCSB], [https://www.ebi.ac.uk/pdbsum/3lmc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lmc ProSAT]</span></td></tr>
 
</table>
===Crystal Structure of zinc-dependent peptidase from Methanocorpusculum labreanum (strain Z), Northeast Structural Genomics Consortium Target MuR16===
== Function ==
 
[https://www.uniprot.org/uniprot/A2SQK8_METLZ A2SQK8_METLZ]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
[[3lmc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanocorpusculum_labreanum Methanocorpusculum labreanum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LMC OCA].  
Check<jmol>
[[Category: Methanocorpusculum labreanum]]
  <jmolCheckbox>
[[Category: Acton, T B.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lm/3lmc_consurf.spt"</scriptWhenChecked>
[[Category: Ashok, S.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Ciccosanti, C.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Everett, J K.]]
  </jmolCheckbox>
[[Category: Hunt, J F.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lmc ConSurf].
[[Category: Kuzin, A.]]
<div style="clear:both"></div>
[[Category: Lee, D.]]
__TOC__
[[Category: Montelione, G T.]]
</StructureSection>
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Large Structures]]
[[Category: Nair, R.]]
[[Category: Methanocorpusculum labreanum Z]]
[[Category: Patel, P.]]
[[Category: Acton TB]]
[[Category: Rost, B.]]
[[Category: Ashok S]]
[[Category: Seetharaman, J.]]
[[Category: Ciccosanti C]]
[[Category: Tong, L.]]
[[Category: Everett JK]]
[[Category: Vorobiev, S]]
[[Category: Hunt JF]]
[[Category: Xiao, R.]]
[[Category: Kuzin A]]
[[Category: A2sqk8]]
[[Category: Lee D]]
[[Category: Hydrolase]]
[[Category: Montelione GT]]
[[Category: Mur16]]
[[Category: Nair R]]
[[Category: Nesg]]
[[Category: Patel P]]
[[Category: Northeast structural genomics consortium]]
[[Category: Rost B]]
[[Category: Protein structure initiative]]
[[Category: Seetharaman J]]
[[Category: Psi-2]]
[[Category: Tong L]]
[[Category: Structural genomic]]
[[Category: Vorobiev S]]
[[Category: Xiao R]]
Retrieved from "https://proteopedia.org/3lmc"