Acid phosphatase: Difference between revisions

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{{STRUCTURE_2b82|  PDB=2b82  | SIZE=400| SCENE= |right|CAPTION=E. coli acid phosphatase class B complex with adenosine, phosphate and Mg+2 ion, [[2b82]] }}
<StructureSection load='' size='400' side='right' caption='Antarctic bacterium protein BA42 complex with Ca2+ ions (PDB code [[4oa3]])' scene='71/715464/Cv/1'>
== Function ==


'''Acid phosphatase''' (ACP) is an enzyme which removes phosphate<br /> from other molecules during digestion.  It catalyzes the conversion of orthophosphoric monoester and H<sub>2</sub>O to alcohol and phosphoric acid.  The enzyme is most effective in acidic environment. Prostatic ACP (PSAP) is produced by the prostate<br />. It is found in increased amounts in patients who have prostate<br /> cancer.  Purple ACP (PAP) contain a dinuclear Fe center and their oxidized for in solution maintains a purple color. Histidine ACP (HAP) catalyze the transfer of phosphoryl group using an active-site histidine.
'''Acid phosphatase''' (ACP, EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.2 3.1.3.2]) is an enzyme which removes phosphate from other molecules during digestion.  It catalyzes the conversion of orthophosphoric monoester and H<sub>2</sub>O to alcohol and phosphoric acid.  The enzyme is most effective in acidic environment, hence its name.<ref>PMID:11950951</ref><br />
*'''Prostatic ACP''' (PSAP) is produced by the prostate<ref>PMID:20645695</ref>.<br />
*'''Purple ACP''' (PAP) or '''tartrate-resistant ACP''' contains a dinuclear Fe center and their oxidized form in solution maintains a purple color<ref>PMID:34402946</ref>. <br />
*'''Histidine ACP''' (HAP) catalyzes the transfer of phosphoryl group using an active-site histidine<ref>PMID:18092946</ref>
*'''N-acetylneuraminic ACP''' is involved in the biosynthesis of N-acetylneuraminate.<br />
*'''Lysophosphatidic ACP''' is involved in signal transduction and storage lipid synthesis<ref>PMID:20045079</ref>.<br />
*'''BA42''' belongs to the TPM protein family from Pfam. The TPM domain family is named after the three founding proteins TLP18.3, Psb32 and MOLO-1. TPM domains have a characteristic fold <scene name='71/715464/Cv/2'>(αβαβαββαα or βαβαββαα)</scene> composed of α helices (3+3<ref>pmid 21908686</ref> or 2+3<ref>pmid 22198206</ref>) flanking four central β strands. The TPM fold has not been found in other protein domains to date. TPM was previously referred to as "DUF477" and "Repair_PSII".


{{TOC limit|limit=2}}
ACP contains 3 classes:<br />
*'''Class A''' is nonspecific and catalyses the dephospho rylation of orthophosphoric monoesters and transphosphorylation<br />.
*'''Class B''' dephosphorylates several phosphoric monsters like 3" and 5'- nucleotides<br />.
*'''Class C''' is nonspecific and does not modify lipids<br />.


== 3D Structures of acid phosphatase ==
In plants, the TPM domain-containing proteins TLP18.3 and Psb32 that have been implicated in the photosystem II (PSII) repair cycle. It may be involved in the regulation of synthesis/degradation of the D1 protein of the PSII core and in the assembly of PSII monomers into dimers in the grana stacks.<ref>pmid 17576201</ref>


[[1qfx]] – ACP – ''Aspergillus niger''<br />
In the model nematode ''C. elegans'', the MOLO-1 protein is an auxiliary subunit that positively modulates the gating of levamisole-sensitive acetylcholine receptors.<ref>pmid 22922783</ref>
[[1dkm]], [[1dkn]] – EcACP (mutant) + Hg – ''Escherichia coli''<br />
[[1dkl]] – EcACP<br />
[[1n8n]] – EcACP-B + Au3<br />
[[1n9k]], [[3cz4]] - EcACP-B + Mg<br />
[[1rmt]] - EcACP-B + adenosine + Mg<br />
[[1rmq]] - EcACP-B + Co + Os<br />
[[1dko]] - EcACP (mutant) + Hg + WO4<BR />
[[2heg]] - EcACP-B + Mg + aspartate-BeF3<br />
[[2hf7]] - EcACP-B + Mg + AlF3<br />
[[1d2t]] - EbACP – ''Escherichia blattae''<br />
[[1iw8]] - EbACP (mutant) <br />
[[1eoi]] – EbACP + MoO4<BR />
[[2akc]] - StACP-A + WO4 - ''Salmonella typhimurium''<br />
[[2p4u]] – mACP1 + phosphate – mouse<br />
[[2gfh]] – mACP acetylneuraminic<br />
[[2i33]] – BaACP-C + Mg – ''Bacillus anthracis''<br />
[[2i34]] - BaACP-C + Mg + WO4<BR />
[[3pct]] – ACP-C – ''Pasteurella multocida''<BR />
[[3et4]], [[3et5]] – HiACP – ''Haemophilus influenzae''<br />


===Acid phosphatase complex with phosphate derivative===
<scene name='71/715464/Cv/4'>1st Ca2+ coordination site</scene>


[[2b82]] - EcACP-B + adenosine + Mg + phosphate<br />
<scene name='71/715464/Cv/6'>2nd Ca2+ coordination site</scene> in Antarctic bacterium protein BA42 (PDB code [[4oa3]]).<ref>PMID:25116514</ref>
[[2b8j]] - EcACP-B + adenosine + Mg + spermine + Au3 + phosphate<br />
[[1rmy]] - EcACP-B + Mg + deoxycytidine + phosphate<br />
[[2g1a]] - EcACP-B + Mg + phosphonic acid derivative<br />
[[1dkp]], [[1dkq]] - EcACP (mutant) + Hg + inositol hexakisphosphate<br />
[[2a96]] – StACP-A + phosphate<br />
[[3ocu]] – HiACP (mutant) + nicotineamide mononucleotide<br />
[[3ocv]], [[3ocw]], [[3ocx]], [[3sf0]] - HiACP (mutant) + AMP<br />
[[3ocy]] - HiACP + phosphate<br />
[[3ocz]] - HiACP + AMP derivative


===Histidine acid phosphatase===
== Disease ==


[[2d1g]] – FtHAP-A + VO4 – ''Francisella tularensis''<br />
PSAP is found in increased amounts in patients who have prostate cancer.
[[2ipb]] - FtHAP-A (mutant) <br />
[[3it0]] - FtHAP-A + phosphate<br />
[[3it1]] - FtHAP-A + tartrate<br />
[[3it2]] - FtHAP-A <br />
[[3it3]] - FtHAP-A (mutant) + 3’- AMP<br />


===Tyrosine acid phosphatase===
== Relevance ==


[[1bvh]] – bYAP – bovine – NMR<br />
PSAP was used as a prostate cancer marker before the develpement of prostate specific antigen (PSA) as one.
[[1pnt]], [[1xww]] – bYAP<br />
[[1z12]] – bYAP + VO4<br />
[[1z13]] – bYAP + MoO4


===Prostate acid phosphatase===
== Structural Highlights ==
<scene name='47/471756/Cv/5'>Hg2+ cation acting as intermolecular bridge</scene> in ''E. coli'' acid phosphatase.<ref>PMID:10655611</ref>


[[1rpa]] – rPSAP + tartaric acid – rat<br />
== 3D Structures of acid phosphatase ==
[[1rpt]] – rPSAP + VO4<BR />
[[Acid phosphatase 3D structures]]
[[2hpa]] – hPSAP + propyl tartramic acid – human<br />
[[1cvi]] – hPSAP<br />
[[2l3h]], [[2l77]], [[2l79]] – hPSAP residues 248-286 - NMR<br />
[[1nd5]], [[1nd6]] – hPSAP + inhibitor
 
===Purple acid phosphatase===
 
[[1kbp]], [[2qfp]], [[2qfr – PvPAP + Fe + Zn – ''Phaseolus vulgaris''<br />
[[3kbp]] - PvPAP + Fe + Zn + WO4<BR />
[[4kbp]] - PvPAP + Fe + Zn + phosphate<br />
[[2qfr]] - PvPAP + Fe + Zn + sulfate<br />
[[1qhw]] - rPAP + Fe + Zn<br />
[[1qfc]] - rPAP + Fe + phosphate<br />
[[1war]] – hPAP + Fe + phosphate<br />
[[2bq8]] - hPAP + Fe + Zn<br />
[[1ute]] – PAP + μ-oxo-diiron – pig<br />
[[1xzw]] - PAP + Fe + Mn + phosphate – sweet potato
 
===Acetylneuraminic acid phosphatase===


[[2gfh]] – mNANP<br />  
</StructureSection>
[[2w4m]] - hNANP


== References ==
<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]

Latest revision as of 09:24, 20 May 2024

Antarctic bacterium protein BA42 complex with Ca2+ ions (PDB code 4oa3)

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References

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman