3ssd: Difference between revisions

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'''Unreleased structure'''


The entry 3ssd is ON HOLD  until Paper Publication
==DNA binding domain of restriction endonuclease bound to DNA==
 
<StructureSection load='3ssd' size='340' side='right'caption='[[3ssd]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
Authors: Sukackaite, R., Grazulis, S., Siksnys, V.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3ssd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SSD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SSD FirstGlance]. <br>
Description: DNA binding domain of restriction endonuclease bound to DNA
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5CM:5-METHYL-2-DEOXY-CYTIDINE-5-MONOPHOSPHATE'>5CM</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ssd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ssd OCA], [https://pdbe.org/3ssd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ssd RCSB], [https://www.ebi.ac.uk/pdbsum/3ssd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ssd ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/MCRB_ECOLI MCRB_ECOLI] Recognizes N4- and C5-methylcytosine (and 5-hydroxy-methylcytosines) produced by a broad range of DNA methylases and appears to act against 5-methylcytosine preceded by a purine residue. Binds to DNA containing methylated cytosines; also binds to GTP. Isoform 33 kDa is less active than isoform 51 kDa and may play a role in regulating the activity of isoform 51 kDa by competing with it in DNA and protein binding abilities.
__TOC__
</StructureSection>
[[Category: Escherichia coli K-12]]
[[Category: Large Structures]]
[[Category: Grazulis S]]
[[Category: Siksnys V]]
[[Category: Sukackaite R]]
Retrieved from "https://proteopedia.org/3ssd"