3lac: Difference between revisions

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[[Image:3lac.png|left|200px]]


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==Crystal structure of Bacillus anthracis pyrrolidone-carboxylate peptidase, pcP==
The line below this paragraph, containing "STRUCTURE_3lac", creates the "Structure Box" on the page.
<StructureSection load='3lac' size='340' side='right'caption='[[3lac]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3lac]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LAC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LAC FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
{{STRUCTURE_3lac|  PDB=3lac  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lac FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lac OCA], [https://pdbe.org/3lac PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lac RCSB], [https://www.ebi.ac.uk/pdbsum/3lac PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lac ProSAT]</span></td></tr>
 
</table>
===Crystal structure of Bacillus anthracis pyrrolidone-carboxylate peptidase, pcP===
== Function ==
 
[https://www.uniprot.org/uniprot/PCP_BACAN PCP_BACAN] Removes 5-oxoproline from various penultimate amino acid residues except L-proline (By similarity).
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
[[3lac]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LAC OCA].  
Check<jmol>
[[Category: Bacillus anthracis]]
  <jmolCheckbox>
[[Category: Pyroglutamyl-peptidase I]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/la/3lac_consurf.spt"</scriptWhenChecked>
[[Category: Anderson, S M.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Anderson, W F.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
  </jmolCheckbox>
[[Category: Edwards, A.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lac ConSurf].
[[Category: Hasseman, J.]]
<div style="clear:both"></div>
[[Category: Onopriyenko, O.]]
__TOC__
[[Category: Savchenko, A.]]
</StructureSection>
[[Category: Wawrzak, Z.]]
[[Category: Alpha beta class]]
[[Category: Bacillus anthracis]]
[[Category: Bacillus anthracis]]
[[Category: Center for structural genomics of infectious disease]]
[[Category: Large Structures]]
[[Category: Csgid]]
[[Category: Anderson SM]]
[[Category: Hydrolase]]
[[Category: Anderson WF]]
[[Category: Protease]]
[[Category: Edwards A]]
[[Category: Structural genomic]]
[[Category: Hasseman J]]
[[Category: Thiol protease]]
[[Category: Onopriyenko O]]
[[Category: Three layer sandwich]]
[[Category: Savchenko A]]
[[Category: Wawrzak Z]]

Latest revision as of 05:57, 17 October 2024

Crystal structure of Bacillus anthracis pyrrolidone-carboxylate peptidase, pcP

3lac, resolution 2.00Å

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