3b0p: Difference between revisions

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[[Image:3b0p.png|left|200px]]


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==tRNA-dihydrouridine synthase from Thermus thermophilus==
The line below this paragraph, containing "STRUCTURE_3b0p", creates the "Structure Box" on the page.
<StructureSection load='3b0p' size='340' side='right'caption='[[3b0p]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3b0p]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B0P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3B0P FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
{{STRUCTURE_3b0p|  PDB=3b0p  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3b0p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b0p OCA], [https://pdbe.org/3b0p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3b0p RCSB], [https://www.ebi.ac.uk/pdbsum/3b0p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3b0p ProSAT]</span></td></tr>
 
</table>
===tRNA-dihydrouridine synthase from Thermus thermophilus===
== Function ==
 
[https://www.uniprot.org/uniprot/DUSAL_THET8 DUSAL_THET8] Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs.[HAMAP-Rule:MF_02041]<ref>PMID:22123979</ref> <ref>PMID:25902496</ref>
 
== References ==
<!--
<references/>
The line below this paragraph, {{ABSTRACT_PUBMED_22123979}}, adds the Publication Abstract to the page
__TOC__
(as it appears on PubMed at http://www.pubmed.gov), where 22123979 is the PubMed ID number.
</StructureSection>
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[[Category: Large Structures]]
{{ABSTRACT_PUBMED_22123979}}
[[Category: Thermus thermophilus HB8]]
 
[[Category: Nakamura A]]
==About this Structure==
[[Category: Tanaka I]]
[[3b0p]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B0P OCA].  
[[Category: Tanaka Y]]
 
[[Category: Yamashita K]]
==Reference==
[[Category: Yao M]]
<ref group="xtra">PMID:022123979</ref><references group="xtra"/>
[[Category: Yu F]]
[[Category: Thermus thermophilus]]
[[Category: Nakamura, A.]]
[[Category: Tanaka, I.]]
[[Category: Tanaka, Y.]]
[[Category: Yamashita, K.]]
[[Category: Yao, M.]]
[[Category: Yu, F.]]
[[Category: Oxidoreductase]]
[[Category: Tim barrel]]

Latest revision as of 14:03, 13 March 2024

tRNA-dihydrouridine synthase from Thermus thermophilus

3b0p, resolution 1.70Å

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