2uz0: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(15 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2uz0.jpg|left|200px]]<br /><applet load="2uz0" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2uz0, resolution 1.70&Aring;" />
'''THE CRYSTAL CRYSTAL STRUCTURE OF THE ESTA PROTEIN, A VIRULENCE FACTOR ESTA PROTEIN FROM STREPTOCOCCUS PNEUMONIA'''<br />


==About this Structure==
==The Crystal crystal structure of the estA protein, a virulence factor estA protein from Streptococcus pneumonia==
2UZ0 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae] with <scene name='pdbligand=CA:'>CA</scene>, <scene name='pdbligand=EDO:'>EDO</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Site: <scene name='pdbsite=AC1:Edo+Binding+Site+For+Chain+B'>AC1</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UZ0 OCA].  
<StructureSection load='2uz0' size='340' side='right'caption='[[2uz0]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
 
== Structural highlights ==
==Reference==
<table><tr><td colspan='2'>[[2uz0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UZ0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2UZ0 FirstGlance]. <br>
The crystal structure of the estA protein, a virulence factor from Streptococcus pneumoniae., Kim MH, Kang BS, Kim S, Kim KJ, Lee CH, Oh BC, Park SC, Oh TK, Proteins. 2008 Feb 1;70(2):578-83. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17932928 17932928]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
[[Category: Single protein]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2uz0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uz0 OCA], [https://pdbe.org/2uz0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2uz0 RCSB], [https://www.ebi.ac.uk/pdbsum/2uz0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2uz0 ProSAT]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uz/2uz0_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2uz0 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Streptococcus pneumoniae]]
[[Category: Streptococcus pneumoniae]]
[[Category: Kang, B.S.]]
[[Category: Kang BS]]
[[Category: Kim, K.J.]]
[[Category: Kim KJ]]
[[Category: Kim, M.H.]]
[[Category: Kim MH]]
[[Category: Oh, T.K.]]
[[Category: Oh TK]]
[[Category: CA]]
[[Category: EDO]]
[[Category: GOL]]
[[Category: a virulence factor for lung infection]]
[[Category: alpha/beta hydrolase]]
[[Category: esterase]]
[[Category: hydrolase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Feb  3 10:48:34 2008''