2joq: Difference between revisions

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[[Image:2joq.png|left|200px]]


<!--
==Solution Structure of Protein HP0495 from H. pylori; Northeast structural genomics consortium target PT2; Ontario Centre for Structural Proteomics target HP0488==
The line below this paragraph, containing "STRUCTURE_2joq", creates the "Structure Box" on the page.
<StructureSection load='2joq' size='340' side='right'caption='[[2joq]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2joq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JOQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JOQ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2joq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2joq OCA], [https://pdbe.org/2joq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2joq RCSB], [https://www.ebi.ac.uk/pdbsum/2joq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2joq ProSAT], [https://www.topsan.org/Proteins/NESGC/2joq TOPSAN]</span></td></tr>
{{STRUCTURE_2joq|  PDB=2joq  |  SCENE=  }}
</table>
 
== Function ==
===Solution Structure of Protein HP0495 from H. pylori; Northeast structural genomics consortium target PT2; Ontario Centre for Structural Proteomics target HP0488===
[https://www.uniprot.org/uniprot/Y495_HELPY Y495_HELPY]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
<!--
Check<jmol>
The line below this paragraph, {{ABSTRACT_PUBMED_21161328}}, adds the Publication Abstract to the page
  <jmolCheckbox>
(as it appears on PubMed at http://www.pubmed.gov), where 21161328 is the PubMed ID number.
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jo/2joq_consurf.spt"</scriptWhenChecked>
-->
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
{{ABSTRACT_PUBMED_21161328}}
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
==About this Structure==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2joq ConSurf].
[[2joq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JOQ OCA].  
<div style="clear:both"></div>
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:021161328</ref><ref group="xtra">PMID:016923391</ref><references group="xtra"/>
[[Category: Helicobacter pylori]]
[[Category: Helicobacter pylori]]
[[Category: Arrowsmith, C H.]]
[[Category: Large Structures]]
[[Category: Gutmanas, A.]]
[[Category: Arrowsmith CH]]
[[Category: Karra, M.]]
[[Category: Gutmanas A]]
[[Category: Lemak, A.]]
[[Category: Karra M]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Lemak A]]
[[Category: OCSP, Ontario Centre for Structural Proteomics.]]
[[Category: Semesi A]]
[[Category: Semesi, A.]]
[[Category: Srisailam S]]
[[Category: Srisailam, S.]]
[[Category: Yee A]]
[[Category: Yee, A.]]
[[Category: Abacus]]
[[Category: Hp0495]]
[[Category: Nesg]]
[[Category: Non-uniform sampling]]
[[Category: Northeast structural genomics consortium]]
[[Category: Ocsp]]
[[Category: Ontario centre for structural proteomic]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
Retrieved from "https://proteopedia.org/2joq"