2ze8: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2ze8.jpg|left|200px]]<br /><applet load="2ze8" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2ze8, resolution 2.80&Aring;" />
'''Crystal Structure of adenosine phosphate-isopentenyltransferase complexed with diphosphate'''<br />


==About this Structure==
==Crystal Structure of adenosine phosphate-isopentenyltransferase complexed with diphosphate==
2ZE8 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens] with <scene name='pdbligand=POP:'>POP</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Adenylate_dimethylallyltransferase Adenylate dimethylallyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.27 2.5.1.27] Known structural/functional Sites: <scene name='pdbsite=AC1:Pop+Binding+Site+For+Residue+A+301'>AC1</scene>, <scene name='pdbsite=AC2:Pop+Binding+Site+For+Residue+B+301'>AC2</scene>, <scene name='pdbsite=AC3:Pop+Binding+Site+For+Residue+C+301'>AC3</scene> and <scene name='pdbsite=AC4:Pop+Binding+Site+For+Residue+D+301'>AC4</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZE8 OCA].  
<StructureSection load='2ze8' size='340' side='right'caption='[[2ze8]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
[[Category: Adenylate dimethylallyltransferase]]
== Structural highlights ==
<table><tr><td colspan='2'>[[2ze8]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZE8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZE8 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=POP:PYROPHOSPHATE+2-'>POP</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ze8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ze8 OCA], [https://pdbe.org/2ze8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ze8 RCSB], [https://www.ebi.ac.uk/pdbsum/2ze8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ze8 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/IPTZ_AGRFC IPTZ_AGRFC] Transfers dimethylallyl groups to AMP as part of the biosynthesis of cytokinin phytohormones.[REFERENCE:5]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ze/2ze8_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ze8 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Agrobacterium tumefaciens]]
[[Category: Agrobacterium tumefaciens]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Sakakibara, H.]]
[[Category: Sakakibara H]]
[[Category: POP]]
[[Category: crown gall tumor]]
[[Category: cytokinin biosynthesis]]
[[Category: plasmid]]
[[Category: transferase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb  6 17:25:25 2008''

Latest revision as of 13:57, 13 March 2024

Crystal Structure of adenosine phosphate-isopentenyltransferase complexed with diphosphate

2ze8, resolution 2.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=2ze8&oldid=4089285"