4dfu: Difference between revisions

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[[Image:4dfu.png|left|200px]]


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==Inhibition of an antibiotic resistance enzyme: crystal structure of aminoglycoside phosphotransferase APH(2")-ID/APH(2")-IVA in complex with kanamycin inhibited with quercetin==
The line below this paragraph, containing "STRUCTURE_4dfu", creates the "Structure Box" on the page.
<StructureSection load='4dfu' size='340' side='right'caption='[[4dfu]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[4dfu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_casseliflavus Enterococcus casseliflavus]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3vcq 3vcq] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3r82 3r82]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DFU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DFU FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.98&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=KAN:KANAMYCIN+A'>KAN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=QUE:3,5,7,3,4-PENTAHYDROXYFLAVONE'>QUE</scene></td></tr>
{{STRUCTURE_4dfu|  PDB=4dfu  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dfu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dfu OCA], [https://pdbe.org/4dfu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dfu RCSB], [https://www.ebi.ac.uk/pdbsum/4dfu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dfu ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/O68183_ENTCA O68183_ENTCA]


===Inhibition of an antibiotic resistance enzyme: crystal structure of aminoglycoside phosphotransferase APH(2")-ID/APH(2")-IVA in complex with kanamycin inhibited with quercetin===
==See Also==
 
*[[Phosphotransferase 3D structures|Phosphotransferase 3D structures]]
 
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</StructureSection>
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(as it appears on PubMed at http://www.pubmed.gov), where 22195561 is the PubMed ID number.
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{{ABSTRACT_PUBMED_22195561}}
 
==About this Structure==
[[4dfu]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterococcus_casseliflavus Enterococcus casseliflavus] and [http://en.wikipedia.org/wiki/Streptomyces_kanamyceticus Streptomyces kanamyceticus]. This structure supersedes the now removed PDB entries  and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3r82 3r82]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DFU OCA].
 
==Reference==
<ref group="xtra">PMID:022195561</ref><references group="xtra"/>
[[Category: Enterococcus casseliflavus]]
[[Category: Enterococcus casseliflavus]]
[[Category: Streptomyces kanamyceticus]]
[[Category: Large Structures]]
[[Category: Anderson, W F.]]
[[Category: Anderson WF]]
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
[[Category: Di Leo R]]
[[Category: Dong, A.]]
[[Category: Dong A]]
[[Category: Egorova, E.]]
[[Category: Egorova E]]
[[Category: Evdokimova, E.]]
[[Category: Evdokimova E]]
[[Category: Leo, R Di.]]
[[Category: Li H]]
[[Category: Li, H.]]
[[Category: Minasov G]]
[[Category: Minasov, G.]]
[[Category: Savchenko A]]
[[Category: Savchenko, A.]]
[[Category: Shakya T]]
[[Category: Shakya, T.]]
[[Category: Stogios PJ]]
[[Category: Stogios, P J.]]
[[Category: Wright GD]]
[[Category: Wright, G D.]]
[[Category: Aminoglycoside phosphotransferase]]
[[Category: Aminoglycoside]]
[[Category: Antibotic]]
[[Category: Center for structural genomics of infectious disease]]
[[Category: Csgid]]
[[Category: Eukaryotic protein kinase-like fold]]
[[Category: Flavanoid]]
[[Category: Intracellular]]
[[Category: Kanamycin]]
[[Category: Kinase]]
[[Category: Quercetin]]
[[Category: Structural genomic]]
[[Category: Transferase]]
[[Category: Transferase-antibiotic-inhibitor complex]]
[[Category: Transferase-antibotic-inhibitor complex]]
Retrieved from "https://proteopedia.org/4dfu"