2xrp: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
m Protected "2xrp" [edit=sysop:move=sysop]
OCA (talk | contribs)
No edit summary
 
(11 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2xrp.png|left|200px]]


<!--
==Human Doublecortin N-DC Repeat (1MJD) and Mammalian Tubulin (1JFF and 3HKE) Docked into the 8-Angstrom Cryo-EM Map of Doublecortin- Stabilised Microtubules==
The line below this paragraph, containing "STRUCTURE_2xrp", creates the "Structure Box" on the page.
<SX load='2xrp' size='340' side='right' viewer='molstar' caption='[[2xrp]], [[Resolution|resolution]] 8.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2xrp]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus] and [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XRP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XRP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 8.2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene></td></tr>
{{STRUCTURE_2xrp|  PDB=2xrp  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xrp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xrp OCA], [https://pdbe.org/2xrp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xrp RCSB], [https://www.ebi.ac.uk/pdbsum/2xrp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xrp ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/TBB2B_BOVIN TBB2B_BOVIN] Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (By similarity).
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Microtubule-associated proteins (MAPs) are essential for regulating and organizing cellular microtubules (MTs). However, our mechanistic understanding of MAP function is limited by a lack of detailed structural information. Using cryo-electron microscopy and single particle algorithms, we solved the 8 A structure of doublecortin (DCX)-stabilized MTs. Because of DCX's unusual ability to specifically nucleate and stabilize 13-protofilament MTs, our reconstruction provides unprecedented insight into the structure of MTs with an in vivo architecture, and in the absence of a stabilizing drug. DCX specifically recognizes the corner of four tubulin dimers, a binding mode ideally suited to stabilizing both lateral and longitudinal lattice contacts. A striking consequence of this is that DCX does not bind the MT seam. DCX binding on the MT surface indirectly stabilizes conserved tubulin-tubulin lateral contacts in the MT lumen, operating independently of the nucleotide bound to tubulin. DCX's exquisite binding selectivity uncovers important insights into regulation of cellular MTs.


===Human Doublecortin N-DC Repeat (1MJD) and Mammalian Tubulin (1JFF and 3HKE) Docked into the 8-Angstrom Cryo-EM Map of Doublecortin- Stabilised Microtubules===
Template-free 13-protofilament microtubule-MAP assembly visualized at 8 A resolution.,Fourniol FJ, Sindelar CV, Amigues B, Clare DK, Thomas G, Perderiset M, Francis F, Houdusse A, Moores CA J Cell Biol. 2010 Nov 1;191(3):463-70. Epub 2010 Oct 25. PMID:20974813<ref>PMID:20974813</ref>


 
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
<!--
</div>
The line below this paragraph, {{ABSTRACT_PUBMED_20974813}}, adds the Publication Abstract to the page
<div class="pdbe-citations 2xrp" style="background-color:#fffaf0;"></div>
(as it appears on PubMed at http://www.pubmed.gov), where 20974813 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_20974813}}
 
==About this Structure==
[[2xrp]] is a 9 chain structure of [[Tubulin]] with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus] and [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XRP OCA].


==See Also==
==See Also==
*[[Tubulin]]
*[[Tubulin 3D Structures|Tubulin 3D Structures]]
 
*[[Tubulin tyrosine ligase 3D structures|Tubulin tyrosine ligase 3D structures]]
==Reference==
== References ==
<ref group="xtra">PMID:020974813</ref><references group="xtra"/>
<references/>
__TOC__
</SX>
[[Category: Bos taurus]]
[[Category: Bos taurus]]
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Tubulin GTPase]]
[[Category: Large Structures]]
[[Category: Amigues, B.]]
[[Category: Amigues B]]
[[Category: Clare, D K.]]
[[Category: Clare DK]]
[[Category: Fourniol, F J.]]
[[Category: Fourniol FJ]]
[[Category: Francis, F.]]
[[Category: Francis F]]
[[Category: Houdusse, A.]]
[[Category: Houdusse A]]
[[Category: Moores, C A.]]
[[Category: Moores CA]]
[[Category: Perderiset, M.]]
[[Category: Perderiset M]]
[[Category: Sindelar, C V.]]
[[Category: Sindelar CV]]
[[Category: Thomas, G.]]
[[Category: Thomas G]]
[[Category: Structural protein]]

Latest revision as of 10:29, 9 May 2024

Human Doublecortin N-DC Repeat (1MJD) and Mammalian Tubulin (1JFF and 3HKE) Docked into the 8-Angstrom Cryo-EM Map of Doublecortin- Stabilised Microtubules

Loading...

Proteopedia Page Contributors and Editors (what is this?)

OCA