3r5f: Difference between revisions

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[[Image:3r5f.png|left|200px]]


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==Crystal structure of D-alanine-D-alnine ligase from Xanthomonas oryzae pv. oryzae with ATP==
The line below this paragraph, containing "STRUCTURE_3r5f", creates the "Structure Box" on the page.
<StructureSection load='3r5f' size='340' side='right'caption='[[3r5f]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3r5f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae_KACC_10331 Xanthomonas oryzae pv. oryzae KACC 10331]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R5F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3R5F FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.07&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_3r5f|  PDB=3r5f  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3r5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r5f OCA], [https://pdbe.org/3r5f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3r5f RCSB], [https://www.ebi.ac.uk/pdbsum/3r5f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3r5f ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5H614_XANOR Q5H614_XANOR] Cell wall formation (By similarity).[SAAS:SAAS005905_004_000867][HAMAP-Rule:MF_00047]


===Crystal structure of D-alanine-D-alnine ligase from Xanthomonas oryzae pv. oryzae with ATP===
==See Also==
 
*[[D-alanine-D-alanine ligase 3D structures|D-alanine-D-alanine ligase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
[[3r5f]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Xanthomonas_oryzae_pv._oryzae Xanthomonas oryzae pv. oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R5F OCA].
[[Category: Large Structures]]
[[Category: D-alanine--D-alanine ligase]]
[[Category: Xanthomonas oryzae pv. oryzae KACC 10331]]
[[Category: Xanthomonas oryzae pv. oryzae]]
[[Category: Doan TTN]]
[[Category: Doan, T T.N.]]
[[Category: Kang LW]]
[[Category: Kang, L W.]]
[[Category: Kim JK]]
[[Category: Kim, J K.]]
[[Category: Atp-grasp domain]]
[[Category: Ligase]]
[[Category: Xoddl-atp complex]]
Retrieved from "https://proteopedia.org/3r5f"