4aod: Difference between revisions

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'''Unreleased structure'''


The entry 4aod is ON HOLD  until sometime in the future
==Biomphalaria glabrata Acetylcholine-binding protein type 1 (BgAChBP1)==
<SX load='4aod' size='340' side='right' viewer='molstar' caption='[[4aod]], [[Resolution|resolution]] 6.00&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[4aod]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Biomphalaria_glabrata Biomphalaria glabrata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AOD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AOD FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 6&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4aod FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4aod OCA], [https://pdbe.org/4aod PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4aod RCSB], [https://www.ebi.ac.uk/pdbsum/4aod PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4aod ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/J9PBR4_BIOGL J9PBR4_BIOGL]
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Nicotinic acetylcholine receptors (nAChR) play important neurophysiological roles and are of considerable medical relevance. They have been studied extensively, greatly facilitated by the gastropod acetylcholine-binding proteins (AChBP) which represent soluble structural and functional homologues of the ligand-binding domain of nAChR. All these proteins are ring-like pentamers. Here we report that AChBP exists in the hemolymph of the planorbid snail Biomphalaria glabrata (vector of the schistosomiasis parasite) as a regular pentagonal dodecahedron, 22 nm in diameter (12 pentamers, 60 active sites). We sequenced and recombinantly expressed two approximately 25 kDa polypeptides (BgAChBP1 and BgAChBP2) with a specific active site, N-glycan site and disulfide bridge variation. We also provide the exon/intron structures. Recombinant BgAChBP1 formed pentamers and dodecahedra, recombinant BgAChBP2 formed pentamers and probably disulfide-bridged di-pentamers, but not dodecahedra. Three-dimensional electron cryo-microscopy (3D-EM) yielded a 3D reconstruction of the dodecahedron with a resolution of 6 A. Homology models of the pentamers docked to the 6 A structure revealed opportunities for chemical bonding at the inter-pentamer interfaces. Definition of the ligand-binding pocket and the gating C-loop in the 6 A structure suggests that 3D-EM might lead to the identification of functional states in the BgAChBP dodecahedron.


Authors: Saur, M., Moeller, V., Kapetanopoulos, K., Braukmann, S., Gebauer, W., Tenzer, S., Markl, J.
Acetylcholine-Binding Protein in the Hemolymph of the Planorbid Snail Biomphalaria glabrata Is a Pentagonal Dodecahedron (60 Subunits).,Saur M, Moeller V, Kapetanopoulos K, Braukmann S, Gebauer W, Tenzer S, Markl J PLoS One. 2012;7(8):e43685. Epub 2012 Aug 20. PMID:22916297<ref>PMID:22916297</ref>


Description: Biomphalaria glabrata Acetylcholine-binding protein type 1 (BgAChBP1)
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 4aod" style="background-color:#fffaf0;"></div>
 
==See Also==
*[[Acetylcholine binding protein 3D structures|Acetylcholine binding protein 3D structures]]
== References ==
<references/>
__TOC__
</SX>
[[Category: Biomphalaria glabrata]]
[[Category: Large Structures]]
[[Category: Braukmann S]]
[[Category: Gebauer W]]
[[Category: Kapetanopoulos K]]
[[Category: Markl J]]
[[Category: Moeller V]]
[[Category: Saur M]]
[[Category: Tenzer S]]

Latest revision as of 10:39, 6 November 2024

Biomphalaria glabrata Acetylcholine-binding protein type 1 (BgAChBP1)

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