2zc0: Difference between revisions

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[[Image:2zc0.png|left|200px]]


<!--
==Crystal structure of an archaeal alanine:glyoxylate aminotransferase==
The line below this paragraph, containing "STRUCTURE_2zc0", creates the "Structure Box" on the page.
<StructureSection load='2zc0' size='340' side='right'caption='[[2zc0]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2zc0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_litoralis Thermococcus litoralis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZC0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZC0 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=PMP:4-DEOXY-4-AMINOPYRIDOXAL-5-PHOSPHATE'>PMP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_2zc0|  PDB=2zc0  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zc0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zc0 OCA], [https://pdbe.org/2zc0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zc0 RCSB], [https://www.ebi.ac.uk/pdbsum/2zc0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zc0 ProSAT]</span></td></tr>
 
</table>
===Crystal structure of an archaeal alanine:glyoxylate aminotransferase===
== Function ==
 
[https://www.uniprot.org/uniprot/Q9C4M4_THELI Q9C4M4_THELI]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_18560158}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 18560158 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zc/2zc0_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_18560158}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
[[2zc0]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermococcus_litoralis Thermococcus litoralis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZC0 OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zc0 ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:018560158</ref><references group="xtra"/>
</StructureSection>
[[Category: Alanine--glyoxylate transaminase]]
[[Category: Large Structures]]
[[Category: Thermococcus litoralis]]
[[Category: Thermococcus litoralis]]
[[Category: Ohshima, T.]]
[[Category: Ohshima T]]
[[Category: Sakuraba, H.]]
[[Category: Sakuraba H]]
[[Category: Tsuge, H.]]
[[Category: Tsuge H]]
[[Category: Yoneda, K.]]
[[Category: Yoneda K]]
[[Category: Alanine:glyoxylate aminotransferase]]
[[Category: Archaea]]
[[Category: Thermococcus litorali]]
[[Category: Transferase]]

Latest revision as of 13:56, 13 March 2024

Crystal structure of an archaeal alanine:glyoxylate aminotransferase

2zc0, resolution 2.30Å

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