3sec: Difference between revisions

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[[Image:3sec.png|left|200px]]


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==Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase complexed with pyrazofurin monophosphate==
The line below this paragraph, containing "STRUCTURE_3sec", creates the "Structure Box" on the page.
<StructureSection load='3sec' size='340' side='right'caption='[[3sec]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3sec]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus_str._Delta_H Methanothermobacter thermautotrophicus str. Delta H]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SEC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SEC FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PFU:(1S)-1,4-ANHYDRO-1-(5-CARBAMOYL-4-HYDROXY-1H-PYRAZOL-3-YL)-5-O-PHOSPHONO-D-RIBITOL'>PFU</scene></td></tr>
{{STRUCTURE_3sec|  PDB=3sec  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sec FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sec OCA], [https://pdbe.org/3sec PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sec RCSB], [https://www.ebi.ac.uk/pdbsum/3sec PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sec ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PYRF_METTH PYRF_METTH] Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP).[HAMAP-Rule:MF_01200_A]


===Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase complexed with pyrazofurin monophosphate===
==See Also==
 
*[[Uridine 5'-monophosphate synthase 3D structures|Uridine 5'-monophosphate synthase 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_20452222}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 20452222 is the PubMed ID number.
[[Category: Methanothermobacter thermautotrophicus str. Delta H]]
-->
[[Category: Kotra LP]]
{{ABSTRACT_PUBMED_20452222}}
[[Category: Liu Y]]
 
[[Category: Pai EF]]
==About this Structure==
[[3sec]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus Methanothermobacter thermautotrophicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SEC OCA].
 
==Reference==
<ref group="xtra">PMID:020452222</ref><references group="xtra"/>
[[Category: Methanothermobacter thermautotrophicus]]
[[Category: Orotidine-5'-phosphate decarboxylase]]
[[Category: Kotra, L P.]]
[[Category: Liu, Y.]]
[[Category: Pai, E F.]]
[[Category: Decarboxylase]]
[[Category: Lyase-lyase inhibitor complex]]
[[Category: Methanothermobacter thermautotrophicus]]
[[Category: Orotidine 5'-monophosphate decarboxylase]]
[[Category: Pyrazofurin monophosphate]]

Latest revision as of 12:54, 14 March 2024

Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase complexed with pyrazofurin monophosphate

3sec, resolution 1.70Å

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