3e7f: Difference between revisions

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==Crystal structure of 6-phosphogluconolactonase from Trypanosoma brucei complexed with 6-phosphogluconic acid==
The line below this paragraph, containing "STRUCTURE_3e7f", creates the "Structure Box" on the page.
<StructureSection load='3e7f' size='340' side='right'caption='[[3e7f]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3e7f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_brucei Trypanosoma brucei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E7F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E7F FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6PG:6-PHOSPHOGLUCONIC+ACID'>6PG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3e7f|  PDB=3e7f  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e7f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e7f OCA], [https://pdbe.org/3e7f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e7f RCSB], [https://www.ebi.ac.uk/pdbsum/3e7f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e7f ProSAT]</span></td></tr>
 
</table>
===Crystal structure of 6-phosphogluconolactonase from Trypanosoma brucei complexed with 6-phosphogluconic acid===
== Function ==
 
[https://www.uniprot.org/uniprot/Q9GRG6_9TRYP Q9GRG6_9TRYP]  
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_19345229}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 19345229 is the PubMed ID number.
  <jmolCheckbox>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e7/3e7f_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_19345229}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
[[3e7f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trypanosoma_brucei Trypanosoma brucei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E7F OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e7f ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:019345229</ref><references group="xtra"/>
</StructureSection>
[[Category: Gluconolactonase]]
[[Category: Large Structures]]
[[Category: Trypanosoma brucei]]
[[Category: Delarue, M.]]
[[Category: Duclert-Savatier, N.]]
[[Category: Poggi, L.]]
[[Category: Stoven, V.]]
[[Category: 6-phosphogluconolactonase]]
[[Category: Catalytic mechanism]]
[[Category: Hydrolase]]
[[Category: Pentose phosphate pathway]]
[[Category: Trypanosoma brucei]]
[[Category: Trypanosoma brucei]]
[[Category: Zinc binding site]]
[[Category: Delarue M]]
[[Category: Duclert-Savatier N]]
[[Category: Poggi L]]
[[Category: Stoven V]]

Latest revision as of 09:45, 21 February 2024

Crystal structure of 6-phosphogluconolactonase from Trypanosoma brucei complexed with 6-phosphogluconic acid

3e7f, resolution 2.20Å

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