1uyj: Difference between revisions

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[[Image:1uyj.png|left|200px]]


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==Clostridium perfringens epsilon toxin shows structural similarity with the pore forming toxin aerolysin==
The line below this paragraph, containing "STRUCTURE_1uyj", creates the "Structure Box" on the page.
<StructureSection load='1uyj' size='340' side='right'caption='[[1uyj]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1uyj]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_perfringens Clostridium perfringens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UYJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UYJ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=U1:URANIUM+ATOM'>U1</scene></td></tr>
{{STRUCTURE_1uyj|  PDB=1uyj  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1uyj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uyj OCA], [https://pdbe.org/1uyj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1uyj RCSB], [https://www.ebi.ac.uk/pdbsum/1uyj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uyj ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q57398_CLOPF Q57398_CLOPF]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uy/1uyj_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1uyj ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Epsilon-toxin from Clostridium perfringens is a lethal toxin. Recent studies suggest that the toxin acts via an unusually potent pore-forming mechanism. Here we report the crystal structure of epsilon-toxin, which reveals structural similarity to aerolysin from Aeromonas hydrophila. Pore-forming toxins can change conformation between soluble and transmembrane states. By comparing the two toxins, we have identified regions important for this transformation.


===CLOSTRIDIUM PERFRINGENS EPSILON TOXIN SHOWS STRUCTURAL SIMILARITY WITH THE PORE FORMING TOXIN AEROLYSIN===
Clostridium perfringens epsilon-toxin shows structural similarity to the pore-forming toxin aerolysin.,Cole AR, Gibert M, Popoff M, Moss DS, Titball RW, Basak AK Nat Struct Mol Biol. 2004 Aug;11(8):797-8. Epub 2004 Jul 18. PMID:15258571<ref>PMID:15258571</ref>


 
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
The line below this paragraph, {{ABSTRACT_PUBMED_15258571}}, adds the Publication Abstract to the page
<div class="pdbe-citations 1uyj" style="background-color:#fffaf0;"></div>
(as it appears on PubMed at http://www.pubmed.gov), where 15258571 is the PubMed ID number.
== References ==
-->
<references/>
{{ABSTRACT_PUBMED_15258571}}
__TOC__
 
</StructureSection>
==About this Structure==
[[1uyj]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_perfringens Clostridium perfringens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UYJ OCA].
 
==Reference==
<ref group="xtra">PMID:015258571</ref><references group="xtra"/>
[[Category: Clostridium perfringens]]
[[Category: Clostridium perfringens]]
[[Category: Basak, A K.]]
[[Category: Large Structures]]
[[Category: Cole, A R.]]
[[Category: Basak AK]]
[[Category: Gibert, M.]]
[[Category: Cole AR]]
[[Category: Moss, D S.]]
[[Category: Gibert M]]
[[Category: Poppoff, M.]]
[[Category: Moss DS]]
[[Category: Titball, R W.]]
[[Category: Poppoff M]]
[[Category: Beta pore forming toxin]]
[[Category: Titball RW]]
[[Category: Toxin]]

Latest revision as of 09:06, 9 May 2024

Clostridium perfringens epsilon toxin shows structural similarity with the pore forming toxin aerolysin

1uyj, resolution 2.60Å

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