3bje: Difference between revisions

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[[Image:3bje.png|left|200px]]


<!--
==Crystal structure of Trypanosoma brucei nucleoside phosphorylase shows uridine phosphorylase activity==
The line below this paragraph, containing "STRUCTURE_3bje", creates the "Structure Box" on the page.
<StructureSection load='3bje' size='340' side='right'caption='[[3bje]], [[Resolution|resolution]] 1.44&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3bje]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_brucei Trypanosoma brucei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BJE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BJE FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.44&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=R1P:RIBOSE-1-PHOSPHATE'>R1P</scene>, <scene name='pdbligand=URA:URACIL'>URA</scene></td></tr>
{{STRUCTURE_3bje|  PDB=3bje  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bje FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bje OCA], [https://pdbe.org/3bje PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bje RCSB], [https://www.ebi.ac.uk/pdbsum/3bje PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bje ProSAT]</span></td></tr>
 
</table>
===Crystal structure of Trypanosoma brucei nucleoside phosphorylase shows uridine phosphorylase activity===
== Function ==
 
[https://www.uniprot.org/uniprot/Q57VZ2_TRYB2 Q57VZ2_TRYB2]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_20070944}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 20070944 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bj/3bje_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_20070944}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
[[3bje]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trypanosoma_brucei Trypanosoma brucei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BJE OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bje ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:020070944</ref><references group="xtra"/>
</StructureSection>
[[Category: Large Structures]]
[[Category: Trypanosoma brucei]]
[[Category: Trypanosoma brucei]]
[[Category: Larson, E T.]]
[[Category: Larson ET]]
[[Category: Merritt, E A.]]
[[Category: Merritt EA]]
[[Category: SGPP, Structural Genomics of Pathogenic Protozoa Consortium.]]
[[Category: Brucei]]
[[Category: Glycosyltransferase]]
[[Category: Medical structural genomics of pathogenic protozoa consortium]]
[[Category: Msgpp]]
[[Category: Nucleoside phosphorylase]]
[[Category: Sleeping sickness]]
[[Category: Structural genomic]]
[[Category: Transferase]]
[[Category: Trypanosoma]]
[[Category: Uridine phosphorylase]]

Latest revision as of 09:29, 21 February 2024

Crystal structure of Trypanosoma brucei nucleoside phosphorylase shows uridine phosphorylase activity

3bje, resolution 1.44Å

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