3iy9: Difference between revisions

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[[Image:3iy9.png|left|200px]]


<!--
==Leishmania Tarentolae Mitochondrial Large Ribosomal Subunit Model==
The line below this paragraph, containing "STRUCTURE_3iy9", creates the "Structure Box" on the page.
<SX load='3iy9' size='340' side='right' viewer='molstar' caption='[[3iy9]], [[Resolution|resolution]] 14.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3iy9]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12], [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Leishmania_tarentolae Leishmania tarentolae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IY9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IY9 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 14.1&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iy9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iy9 OCA], [https://pdbe.org/3iy9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iy9 RCSB], [https://www.ebi.ac.uk/pdbsum/3iy9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iy9 ProSAT]</span></td></tr>
{{STRUCTURE_3iy9|  PDB=3iy9  |  SCENE=  }}
</table>
 
== Function ==
===Leishmania Tarentolae Mitochondrial Large Ribosomal Subunit Model===
[https://www.uniprot.org/uniprot/RM02_BOVIN RM02_BOVIN]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
<!--
Check<jmol>
The line below this paragraph, {{ABSTRACT_PUBMED_19497863}}, adds the Publication Abstract to the page
  <jmolCheckbox>
(as it appears on PubMed at http://www.pubmed.gov), where 19497863 is the PubMed ID number.
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iy/3iy9_consurf.spt"</scriptWhenChecked>
-->
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
{{ABSTRACT_PUBMED_19497863}}
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
==About this Structure==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iy9 ConSurf].
[[3iy9]] is a 20 chain structure of [[Ribosomal protein L11]], [[Ribosomal protein L13]], [[Ribosomal protein L14]], [[Ribosomal protein L15]], [[Ribosomal protein L16]], [[Ribosomal protein L17]], [[Ribosomal protein L2]], [[Ribosomal protein L3]], [[Ribosomal protein L4]], [[Ribosomal protein L5]] and [[Ribosomal protein L9]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli], [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Leishmania_tarentolae Leishmania tarentolae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IY9 OCA].  
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Ribosomal protein L11|Ribosomal protein L11]]
*[[Ribosome 3D structures|Ribosome 3D structures]]
*[[Ribosomal protein L13|Ribosomal protein L13]]
__TOC__
*[[Ribosomal protein L14|Ribosomal protein L14]]
</SX>
*[[Ribosomal protein L15|Ribosomal protein L15]]
[[Category: Escherichia coli K-12]]
*[[Ribosomal protein L16|Ribosomal protein L16]]
*[[Ribosomal protein L17|Ribosomal protein L17]]
*[[Ribosomal protein L2|Ribosomal protein L2]]
*[[Ribosomal protein L3|Ribosomal protein L3]]
*[[Ribosomal protein L4|Ribosomal protein L4]]
*[[Ribosomal protein L5|Ribosomal protein L5]]
*[[Ribosomal protein L9|Ribosomal protein L9]]
 
==Reference==
<ref group="xtra">PMID:019497863</ref><ref group="xtra">PMID:016272117</ref><ref group="xtra">PMID:016510155</ref><references group="xtra"/>
[[Category: Escherichia coli]]
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Leishmania tarentolae]]
[[Category: Leishmania tarentolae]]
[[Category: Agrawal, R K.]]
[[Category: Agrawal RK]]
[[Category: Booth, T M.]]
[[Category: Booth TM]]
[[Category: Maslov, D A.]]
[[Category: Maslov DA]]
[[Category: Sharma, M R.]]
[[Category: Sharma MR]]
[[Category: Simpson, L.]]
[[Category: Simpson L]]
[[Category: Cryoem]]
[[Category: Leishmania tarentolae]]
[[Category: Methylation]]
[[Category: Minimal rna.]]
[[Category: Mitochondrial ribosome]]
[[Category: Mitochondrion]]
[[Category: Ribonucleoprotein]]
[[Category: Ribosomal protein]]
[[Category: Ribosome]]
[[Category: Rna-binding]]
[[Category: Rrna-binding]]
[[Category: Transit peptide]]

Latest revision as of 10:07, 21 February 2024

Leishmania Tarentolae Mitochondrial Large Ribosomal Subunit Model

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