2bas: Difference between revisions

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[[Image:2bas.png|left|200px]]


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==Crystal Structure of the Bacillus subtilis YkuI Protein, with an EAL Domain.==
The line below this paragraph, containing "STRUCTURE_2bas", creates the "Structure Box" on the page.
<StructureSection load='2bas' size='340' side='right'caption='[[2bas]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2bas]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BAS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BAS FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.61&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2bas|  PDB=2bas  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bas FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bas OCA], [https://pdbe.org/2bas PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bas RCSB], [https://www.ebi.ac.uk/pdbsum/2bas PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bas ProSAT], [https://www.topsan.org/Proteins/MCSG/2bas TOPSAN]</span></td></tr>
 
</table>
===Crystal Structure of the Bacillus subtilis YkuI Protein, with an EAL Domain.===
== Function ==
 
[https://www.uniprot.org/uniprot/YKUI_BACSU YKUI_BACSU]
 
== Evolutionary Conservation ==
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ba/2bas_consurf.spt"</scriptWhenChecked>
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    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
[[2bas]] is a 2 chain structure of [[C-di-GMP specific phosphodiesterases]] with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BAS OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bas ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[C-di-GMP specific phosphodiesterases|C-di-GMP specific phosphodiesterases]]
*[[Phosphodiesterase 3D structures|Phosphodiesterase 3D structures]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:019244251</ref><references group="xtra"/>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Anderson, W F.]]
[[Category: Large Structures]]
[[Category: Brunzelle, J S.]]
[[Category: Anderson WF]]
[[Category: Collart, F R.]]
[[Category: Brunzelle JS]]
[[Category: Joachimiak, A.]]
[[Category: Collart FR]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Joachimiak A]]
[[Category: Miller, D J.]]
[[Category: Miller DJ]]
[[Category: Minasov, G.]]
[[Category: Minasov G]]
[[Category: Shuvalova, L.]]
[[Category: Shuvalova L]]
[[Category: Crystal structure]]
[[Category: Eal domain]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Signaling protein]]
[[Category: Structural genomic]]
[[Category: Ykui protein]]
Retrieved from "https://proteopedia.org/2bas"