3udg: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3udg.png|left|200px]]


<!--
==Structure of Deinococcus radiodurans SSB bound to ssDNA==
The line below this paragraph, containing "STRUCTURE_3udg", creates the "Structure Box" on the page.
<StructureSection load='3udg' size='340' side='right'caption='[[3udg]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3udg]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans_R1 Deinococcus radiodurans R1] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UDG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3UDG FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TMP:THYMIDINE-5-PHOSPHATE'>TMP</scene></td></tr>
{{STRUCTURE_3udg|  PDB=3udg  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3udg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3udg OCA], [https://pdbe.org/3udg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3udg RCSB], [https://www.ebi.ac.uk/pdbsum/3udg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3udg ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/SSB_DEIRA SSB_DEIRA] This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair (By similarity).


===Structure of Deinococcus radiodurans SSB bound to ssDNA===
==See Also==
 
*[[Single-stranded DNA-binding protein 3D structures|Single-stranded DNA-binding protein 3D structures]]
 
__TOC__
<!--  
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_22570477}}, adds the Publication Abstract to the page
[[Category: Deinococcus radiodurans R1]]
(as it appears on PubMed at http://www.pubmed.gov), where 22570477 is the PubMed ID number.
[[Category: Large Structures]]
-->
[[Category: Synthetic construct]]
{{ABSTRACT_PUBMED_22570477}}
[[Category: Battista JR]]
 
[[Category: Chitteni-Patu S]]
==About this Structure==
[[Category: Cox MM]]
[[3udg]] is a 9 chain structure with sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UDG OCA].
[[Category: George NP]]
 
[[Category: Keck JL]]
==Reference==
[[Category: Ngo KV]]
<ref group="xtra">PMID:022570477</ref><references group="xtra"/>
[[Category: Norais CA]]
[[Category: Deinococcus radiodurans]]
[[Category: Battista, J R.]]
[[Category: Chitteni-Patu, S.]]
[[Category: Cox, M M.]]
[[Category: George, N P.]]
[[Category: Keck, J L.]]
[[Category: Ngo, K V.]]
[[Category: Norais, C A.]]
[[Category: Beta-barrel]]
[[Category: Dna binding protein-dna complex]]
[[Category: Ob fold]]
[[Category: Single-stranded dna-binding]]
[[Category: Ssb]]
Retrieved from "https://proteopedia.org/3udg"