3hte: Difference between revisions

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[[Image:3hte.png|left|200px]]


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==Crystal structure of nucleotide-free hexameric ClpX==
The line below this paragraph, containing "STRUCTURE_3hte", creates the "Structure Box" on the page.
<StructureSection load='3hte' size='340' side='right'caption='[[3hte]], [[Resolution|resolution]] 4.03&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3hte]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HTE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HTE FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 4.026&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_3hte|  PDB=3hte  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hte FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hte OCA], [https://pdbe.org/3hte PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hte RCSB], [https://www.ebi.ac.uk/pdbsum/3hte PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hte ProSAT]</span></td></tr>
 
</table>
===Crystal structure of nucleotide-free hexameric ClpX===
== Function ==
 
[https://www.uniprot.org/uniprot/CLPX_ECOLI CLPX_ECOLI] ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. It may bind to the lambda O substrate protein and present it to the ClpP protease in a form that can be recognized and readily hydrolyzed by ClpP. Can perform chaperone functions in the absence of ClpP.[HAMAP-Rule:MF_00175]
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_19914167}}, adds the Publication Abstract to the page
Check<jmol>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ht/3hte_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_19914167}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
[[3hte]] is a 6 chain structure of [[ClpX]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HTE OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hte ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[ClpX|ClpX]]
*[[Clp protease 3D structures|Clp protease 3D structures]]
*[[Molecular Playground/Hexameric ClpX|Molecular Playground/Hexameric ClpX]]
__TOC__
 
</StructureSection>
==Reference==
[[Category: Escherichia coli K-12]]
<ref group="xtra">PMID:019914167</ref><references group="xtra"/>
[[Category: Large Structures]]
[[Category: Escherichia coli]]
[[Category: Baker TA]]
[[Category: Baker, T A.]]
[[Category: Glynn SE]]
[[Category: Glynn, S E.]]
[[Category: Martin A]]
[[Category: Martin, A.]]
[[Category: Sauer RT]]
[[Category: Sauer, R T.]]
[[Category: Aaa+ molecular machine]]
[[Category: Asymmetric]]
[[Category: Atp-binding]]
[[Category: Chaperone]]
[[Category: Clpx]]
[[Category: Hexamer]]
[[Category: Metal binding protein]]
[[Category: Metal-binding]]
[[Category: Motor protein]]
[[Category: Nucleotide-binding]]
[[Category: Stress response]]
[[Category: Zinc-finger]]

Latest revision as of 10:01, 21 February 2024

Crystal structure of nucleotide-free hexameric ClpX

3hte, resolution 4.03Å

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