3c8c: Difference between revisions

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New page: left|200px<br /><applet load="3c8c" size="350" color="white" frame="true" align="right" spinBox="true" caption="3c8c, resolution 1.50Å" /> '''Crystal structure of...
 
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[[Image:3c8c.jpg|left|200px]]<br /><applet load="3c8c" size="350" color="white" frame="true" align="right" spinBox="true"
caption="3c8c, resolution 1.50&Aring;" />
'''Crystal structure of Mcp_N and cache domains of methyl-accepting chemotaxis protein from Vibrio cholerae'''<br />


==About this Structure==
==Crystal structure of Mcp_N and cache domains of methyl-accepting chemotaxis protein from Vibrio cholerae==
3C8C is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae_o1_biovar_eltor_str._n16961 Vibrio cholerae o1 biovar eltor str. n16961] with <scene name='pdbligand=MG:'>MG</scene> and <scene name='pdbligand=ALA:'>ALA</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Sites: <scene name='pdbsite=AC1:Mg+Binding+Site+For+Residue+B+501'>AC1</scene> and <scene name='pdbsite=AC2:Mg+Binding+Site+For+Residue+A+501'>AC2</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C8C OCA].
<StructureSection load='3c8c' size='340' side='right'caption='[[3c8c]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Vibrio cholerae o1 biovar eltor str. n16961]]
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C8C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C8C FirstGlance]. <br>
[[Category: Almo, S C.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
[[Category: Burley, S K.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ALA:ALANINE'>ALA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Freeman, J.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c8c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c8c OCA], [https://pdbe.org/3c8c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c8c RCSB], [https://www.ebi.ac.uk/pdbsum/3c8c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c8c ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3c8c TOPSAN]</span></td></tr>
[[Category: Hu, S.]]
</table>
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
== Evolutionary Conservation ==
[[Category: Ozyurt, S.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Patskovsky, Y.]]
Check<jmol>
[[Category: Sauder, J M.]]
  <jmolCheckbox>
[[Category: Smith, D.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c8/3c8c_consurf.spt"</scriptWhenChecked>
[[Category: Wasserman, S R.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: ALA]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: MG]]
  </jmolCheckbox>
[[Category: new york structural genomix research consortium]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c8c ConSurf].
[[Category: nysgxrc]]
<div style="clear:both"></div>
[[Category: predicted chemotaxis protein]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomics]]
[[Category: uncharacterized protein]]
[[Category: unknown function]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 11:33:24 2008''
==See Also==
*[[Chemotaxis protein 3D structures|Chemotaxis protein 3D structures]]
*[[Methyl-accepting chemotaxis protein|Methyl-accepting chemotaxis protein]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Almo SC]]
[[Category: Burley SK]]
[[Category: Freeman J]]
[[Category: Hu S]]
[[Category: Ozyurt S]]
[[Category: Patskovsky Y]]
[[Category: Sauder JM]]
[[Category: Smith D]]
[[Category: Wasserman SR]]
Retrieved from "https://proteopedia.org/3c8c"