2qrr: Difference between revisions
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==Crystal structure of the soluble domain of the ABC transporter, ATP-binding protein from Vibrio parahaemolyticus== | |||
<StructureSection load='2qrr' size='340' side='right'caption='[[2qrr]], [[Resolution|resolution]] 1.71Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2qrr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibpa Vibpa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QRR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QRR FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | |||
== | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
[[2qrr]] is a 2 chain structure | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">metN, VP0706 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223926 VIBPA])</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qrr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qrr OCA], [https://pdbe.org/2qrr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qrr RCSB], [https://www.ebi.ac.uk/pdbsum/2qrr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qrr ProSAT], [https://www.topsan.org/Proteins/MCSG/2qrr TOPSAN]</span></td></tr> | |||
</table> | |||
== Function == | |||
[[https://www.uniprot.org/uniprot/METN_VIBPA METN_VIBPA]] Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system (By similarity). | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qr/2qrr_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qrr ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | ==See Also== | ||
*[[ABC transporter|ABC transporter]] | *[[ABC transporter 3D structures|ABC transporter 3D structures]] | ||
[[Category: | *[[Endonuclease 3D structures|Endonuclease 3D structures]] | ||
[[Category: Freeman, L | __TOC__ | ||
[[Category: Joachimiak, A | </StructureSection> | ||
[[Category: Kim, Y | [[Category: Large Structures]] | ||
[[Category: | [[Category: Vibpa]] | ||
[[Category: Zhou, M | [[Category: Freeman, L]] | ||
[[Category: Joachimiak, A]] | |||
[[Category: Kim, Y]] | |||
[[Category: Structural genomic]] | |||
[[Category: Zhou, M]] | |||
[[Category: Alpha-beta structure]] | [[Category: Alpha-beta structure]] | ||
[[Category: Amino-acid transport]] | [[Category: Amino-acid transport]] | ||
| Line 24: | Line 41: | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
[[Category: Membrane]] | [[Category: Membrane]] | ||
[[Category: Nucleotide-binding]] | [[Category: Nucleotide-binding]] | ||
[[Category: Protein structure initiative | [[Category: PSI, Protein structure initiative]] | ||
[[Category: Transport]] | [[Category: Transport]] | ||
