2jel: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(9 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2jel.png|left|200px]]


{{STRUCTURE_2jel|  PDB=2jel  |  SCENE=  }}
==JEL42 FAB/HPR COMPLEX==
 
<StructureSection load='2jel' size='340' side='right'caption='[[2jel]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
===JEL42 FAB/HPR COMPLEX===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2jel]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1jel 1jel]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JEL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JEL FirstGlance]. <br>
{{ABSTRACT_PUBMED_9671553}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jel FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jel OCA], [https://pdbe.org/2jel PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jel RCSB], [https://www.ebi.ac.uk/pdbsum/2jel PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jel ProSAT]</span></td></tr>
[[2jel]] is a 3 chain structure of [[Antibody]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1jel 1jel]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JEL OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/PTHP_ECOLI PTHP_ECOLI] General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The phosphoryl group from phosphoenolpyruvate (PEP) is transferred to the phosphoryl carrier protein HPr by enzyme I. Phospho-HPr then transfers it to the permease (enzymes II/III).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/je/2jel_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jel ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Antibody|Antibody]]
*[[Antibody 3D structures|Antibody 3D structures]]
 
*[[Phosphocarrier protein HPr 3D structures|Phosphocarrier protein HPr 3D structures]]
==Reference==
*[[3D structures of non-human antibody|3D structures of non-human antibody]]
<ref group="xtra">PMID:009671553</ref><ref group="xtra">PMID:016754982</ref><references group="xtra"/>
__TOC__
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
[[Category: Delbaere, L T.J.]]
[[Category: Delbaere LTJ]]
[[Category: Lee, J S.]]
[[Category: Lee JS]]
[[Category: Prasad, L.]]
[[Category: Prasad L]]
[[Category: Waygood, E B.]]
[[Category: Waygood EB]]
[[Category: Antibody-protein complex]]
[[Category: Histidine-containing protein]]
[[Category: Molecular recognition]]

Latest revision as of 06:28, 3 April 2024

JEL42 FAB/HPR COMPLEX

2jel, resolution 2.50Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA