3py8: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3py8.png|left|200px]]


{{STRUCTURE_3py8|  PDB=3py8  |  SCENE=  }}
==Crystal structure of a mutant of the large fragment of DNA polymerase I from thermus aquaticus in a closed ternary complex with DNA and ddCTP==
 
<StructureSection load='3py8' size='340' side='right'caption='[[3py8]], [[Resolution|resolution]] 1.74&Aring;' scene=''>
===Crystal structure of a mutant of the large fragment of DNA polymerase I from thermus aquaticus in a closed ternary complex with DNA and ddCTP===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3py8]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PY8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PY8 FirstGlance]. <br>
{{ABSTRACT_PUBMED_21480455}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.74&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DCT:2,3-DIDEOXYCYTIDINE+5-TRIPHOSPHATE'>DCT</scene>, <scene name='pdbligand=DOC:2,3-DIDEOXYCYTIDINE-5-MONOPHOSPHATE'>DOC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3py8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3py8 OCA], [https://pdbe.org/3py8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3py8 RCSB], [https://www.ebi.ac.uk/pdbsum/3py8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3py8 ProSAT]</span></td></tr>
[[3py8]] is a 3 chain structure of [[DNA polymerase]] with sequence from [http://en.wikipedia.org/wiki/Thermus_aquaticus Thermus aquaticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PY8 OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/DPO1_THEAQ DPO1_THEAQ]


==See Also==
==See Also==
*[[DNA polymerase|DNA polymerase]]
*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:021480455</ref><references group="xtra"/>
[[Category: Large Structures]]
[[Category: DNA-directed DNA polymerase]]
[[Category: Thermus aquaticus]]
[[Category: Thermus aquaticus]]
[[Category: Diederichs, K.]]
[[Category: Diederichs K]]
[[Category: Marx, A.]]
[[Category: Marx A]]
[[Category: Schnur, A.]]
[[Category: Schnur A]]
[[Category: Welte, W.]]
[[Category: Welte W]]
[[Category: 5'-3' exonuclease activity]]
[[Category: Artificial nucleotide]]
[[Category: Catalytic activity]]
[[Category: Dna binding]]
[[Category: Dna-directed dna polymerase activity]]
[[Category: Modified klenow fragment]]
[[Category: Modified nucleotide]]
[[Category: Nucleic acid binding]]
[[Category: Nucleoside binding]]
[[Category: Nucleotide probe]]
[[Category: Nucleotide]]
[[Category: Polymerase]]
[[Category: Transferase]]
[[Category: Transferase-dna complex]]
Retrieved from "https://proteopedia.org/3py8"