3g2l: Difference between revisions

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[[Image:3g2l.png|left|200px]]


{{STRUCTURE_3g2l|  PDB=3g2l  |  SCENE=  }}
==Crystal structure of 1-(beta-D-glucopyranosyl)-4-substituted-1,2,3-triazoles in complex with glycogen phosphorylase==
 
<StructureSection load='3g2l' size='340' side='right'caption='[[3g2l]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
===Crystal structure of 1-(beta-D-glucopyranosyl)-4-substituted-1,2,3-triazoles in complex with glycogen phosphorylase===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3g2l]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G2L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3G2L FirstGlance]. <br>
{{ABSTRACT_PUBMED_15299833}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LEW:1-BETA-D-GLUCOPYRANOSYL-4-NAPHTHALEN-1-YL-1H-1,2,3-TRIAZOLE'>LEW</scene>, <scene name='pdbligand=LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC+ACID'>LLP</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3g2l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g2l OCA], [https://pdbe.org/3g2l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3g2l RCSB], [https://www.ebi.ac.uk/pdbsum/3g2l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3g2l ProSAT]</span></td></tr>
[[3g2l]] is a 1 chain structure of [[Glycogen Phosphorylase]] with sequence from [http://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G2L OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/PYGM_RABIT PYGM_RABIT] Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g2/3g2l_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3g2l ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Glycogen Phosphorylase|Glycogen Phosphorylase]]
*[[Glycogen phosphorylase 3D structures|Glycogen phosphorylase 3D structures]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:015299833</ref><references group="xtra"/>
[[Category: Large Structures]]
[[Category: Oryctolagus cuniculus]]
[[Category: Oryctolagus cuniculus]]
[[Category: Phosphorylase]]
[[Category: Alexacou K-M]]
[[Category: Alexacou, K M.]]
[[Category: Bokor E]]
[[Category: Bokor, E.]]
[[Category: Charavgi M-D]]
[[Category: Charavgi, M D.]]
[[Category: Chrysina ED]]
[[Category: Chrysina, E D.]]
[[Category: Leonidas DD]]
[[Category: Leonidas, D D.]]
[[Category: Oikonomakos GN]]
[[Category: Oikonomakos, G N.]]
[[Category: Oikonomakos NG]]
[[Category: Oikonomakos, N G.]]
[[Category: Somsak L]]
[[Category: Somsak, L.]]
[[Category: Zographos SE]]
[[Category: Zographos, S E.]]
[[Category: 3-triazole bioisosterism]]
[[Category: Allosteric enzyme]]
[[Category: Amide-1]]
[[Category: Carbohydrate metabolism]]
[[Category: Glycogen metabolism]]
[[Category: Glycogen phosphorylase]]
[[Category: Glycosyltransferase]]
[[Category: Nucleotide-binding]]
[[Category: Phosphoprotein]]
[[Category: Pyridoxal phosphate]]
[[Category: Transferase]]

Latest revision as of 06:57, 6 September 2023

Crystal structure of 1-(beta-D-glucopyranosyl)-4-substituted-1,2,3-triazoles in complex with glycogen phosphorylase

3g2l, resolution 2.30Å

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