3jtz: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3jtz.png|left|200px]]


{{STRUCTURE_3jtz|  PDB=3jtz  |  SCENE=  }}
==Structure of the arm-type binding domain of HPI integrase==
 
<StructureSection load='3jtz' size='340' side='right'caption='[[3jtz]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
===Structure of the arm-type binding domain of HPI integrase===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3jtz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis Yersinia pestis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JTZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JTZ FirstGlance]. <br>
{{ABSTRACT_PUBMED_019737930}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jtz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jtz OCA], [https://pdbe.org/3jtz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jtz RCSB], [https://www.ebi.ac.uk/pdbsum/3jtz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jtz ProSAT]</span></td></tr>
[[3jtz]] is a 1 chain structure of [[Phage integrase]] with sequence from [http://en.wikipedia.org/wiki/Yersinia_pestis Yersinia pestis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JTZ OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9Z3B4_YERPE Q9Z3B4_YERPE]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jt/3jtz_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3jtz ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Phage integrase|Phage integrase]]
*[[Integrase|Integrase]]
 
*[[Retroviral integrase 3D structures|Retroviral integrase 3D structures]]
==Reference==
__TOC__
<ref group="xtra">PMID:019737930</ref><references group="xtra"/>
</StructureSection>
[[Category: Large Structures]]
[[Category: Yersinia pestis]]
[[Category: Yersinia pestis]]
[[Category: Antonenka, U.]]
[[Category: Antonenka U]]
[[Category: Holak, T A.]]
[[Category: Holak TA]]
[[Category: Popowicz, G M.]]
[[Category: Popowicz GM]]
[[Category: Rakin, A.]]
[[Category: Rakin A]]
[[Category: Sitar, T.]]
[[Category: Sitar T]]
[[Category: Szwagierczak, A.]]
[[Category: Szwagierczak A]]
[[Category: Dna binding protein]]
[[Category: Four stranded beta-sheet]]