3ife: Difference between revisions
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==1.55 Angstrom Resolution Crystal Structure of Peptidase T (pepT-1) from Bacillus anthracis str. 'Ames Ancestor'.== | |||
<StructureSection load='3ife' size='340' side='right'caption='[[3ife]], [[Resolution|resolution]] 1.55Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3ife]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_str._'Ames_Ancestor' Bacillus anthracis str. 'Ames Ancestor']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IFE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IFE FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55Å</td></tr> | |||
== | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PRD_900003:sucrose'>PRD_900003</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
[[3ife]] is a 1 chain structure | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ife FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ife OCA], [https://pdbe.org/3ife PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ife RCSB], [https://www.ebi.ac.uk/pdbsum/3ife PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ife ProSAT], [https://www.topsan.org/Proteins/CSGID/3ife TOPSAN]</span></td></tr> | ||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/PEPT_BACAN PEPT_BACAN] Cleaves the N-terminal amino acid of tripeptides (By similarity). | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/if/3ife_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ife ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | ==See Also== | ||
*[[Peptidase T|Peptidase T]] | *[[Peptidase T|Peptidase T]] | ||
[[Category: Bacillus anthracis]] | __TOC__ | ||
[[Category: | </StructureSection> | ||
[[Category: Anderson | [[Category: Bacillus anthracis str. 'Ames Ancestor']] | ||
[[Category: Large Structures]] | |||
[[Category: Dubrovska | [[Category: Anderson WF]] | ||
[[Category: Halavaty | [[Category: Dubrovska I]] | ||
[[Category: Minasov | [[Category: Halavaty A]] | ||
[[Category: Shuvalova | [[Category: Minasov G]] | ||
[[Category: Winsor | [[Category: Shuvalova L]] | ||
[[Category: Winsor J]] | |||