3ife: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
m Protected "3ife" [edit=sysop:move=sysop]
OCA (talk | contribs)
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3ife.png|left|200px]]


{{STRUCTURE_3ife|  PDB=3ife  |  SCENE=  }}
==1.55 Angstrom Resolution Crystal Structure of Peptidase T (pepT-1) from Bacillus anthracis str. 'Ames Ancestor'.==
 
<StructureSection load='3ife' size='340' side='right'caption='[[3ife]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
===1.55 Angstrom Resolution Crystal Structure of Peptidase T (pepT-1) from Bacillus anthracis str. 'Ames Ancestor'.===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3ife]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_str._'Ames_Ancestor' Bacillus anthracis str. 'Ames Ancestor']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IFE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IFE FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PRD_900003:sucrose'>PRD_900003</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
[[3ife]] is a 1 chain structure of [[Peptidase T]] with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IFE OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ife FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ife OCA], [https://pdbe.org/3ife PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ife RCSB], [https://www.ebi.ac.uk/pdbsum/3ife PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ife ProSAT], [https://www.topsan.org/Proteins/CSGID/3ife TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PEPT_BACAN PEPT_BACAN] Cleaves the N-terminal amino acid of tripeptides (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/if/3ife_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ife ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Peptidase T|Peptidase T]]
*[[Peptidase T|Peptidase T]]
[[Category: Bacillus anthracis]]
__TOC__
[[Category: Tripeptide aminopeptidase]]
</StructureSection>
[[Category: Anderson, W F.]]
[[Category: Bacillus anthracis str. 'Ames Ancestor']]
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
[[Category: Large Structures]]
[[Category: Dubrovska, I.]]
[[Category: Anderson WF]]
[[Category: Halavaty, A.]]
[[Category: Dubrovska I]]
[[Category: Minasov, G.]]
[[Category: Halavaty A]]
[[Category: Shuvalova, L.]]
[[Category: Minasov G]]
[[Category: Winsor, J.]]
[[Category: Shuvalova L]]
[[Category: Aminopeptidase]]
[[Category: Winsor J]]
[[Category: Center for structural genomics of infectious disease]]
[[Category: Csgid]]
[[Category: Hydrolase]]
[[Category: Metal-binding]]
[[Category: Metallopeptidase]]
[[Category: Metalloprotease]]
[[Category: Pept-1]]
[[Category: Peptidase t]]
[[Category: Protease]]
[[Category: Structural genomic]]