1y07: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| (7 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
==Crystal structure of the superoxide reductase from Treponema pallidum== | |||
<StructureSection load='1y07' size='340' side='right'caption='[[1y07]], [[Resolution|resolution]] 1.55Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[1y07]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Treponema_pallidum_subsp._pallidum_str._Nichols Treponema pallidum subsp. pallidum str. Nichols]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y07 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y07 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | |||
== | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y07 OCA], [https://pdbe.org/1y07 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y07 RCSB], [https://www.ebi.ac.uk/pdbsum/1y07 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y07 ProSAT]</span></td></tr> | ||
[[1y07]] is a 4 chain structure | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/O83795_TREPA O83795_TREPA] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y0/1y07_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1y07 ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | ==See Also== | ||
*[[Superoxide Reductase|Superoxide Reductase]] | *[[Superoxide Reductase|Superoxide Reductase]] | ||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: | [[Category: Treponema pallidum subsp. pallidum str. Nichols]] | ||
[[Category: Treponema pallidum subsp. pallidum str. | [[Category: Auchere F]] | ||
[[Category: Auchere | [[Category: Bonifacio C]] | ||
[[Category: Bonifacio | [[Category: Carvalho AL]] | ||
[[Category: Carvalho | [[Category: Moura J]] | ||
[[Category: Moura | [[Category: Romao MJ]] | ||
[[Category: Romao | [[Category: Santos-Silva T]] | ||
[[Category: Santos-Silva | [[Category: Trincao J]] | ||
[[Category: Trincao | |||
Latest revision as of 13:37, 13 March 2024
Crystal structure of the superoxide reductase from Treponema pallidum
| ||||||||||||
