1ddk: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
m Protected "1ddk" [edit=sysop:move=sysop]
OCA (talk | contribs)
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1ddk.png|left|200px]]


{{STRUCTURE_1ddk|  PDB=1ddk  |  SCENE=  }}
==CRYSTAL STRUCTURE OF IMP-1 METALLO BETA-LACTAMASE FROM PSEUDOMONAS AERUGINOSA==
 
<StructureSection load='1ddk' size='340' side='right'caption='[[1ddk]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
===CRYSTAL STRUCTURE OF IMP-1 METALLO BETA-LACTAMASE FROM PSEUDOMONAS AERUGINOSA===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1ddk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DDK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DDK FirstGlance]. <br>
{{ABSTRACT_PUBMED_10757977}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ddk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ddk OCA], [https://pdbe.org/1ddk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ddk RCSB], [https://www.ebi.ac.uk/pdbsum/1ddk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ddk ProSAT]</span></td></tr>
[[1ddk]] is a 1 chain structure of [[Beta-lactamase]] with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DDK OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q79MP6_PSEAI Q79MP6_PSEAI]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dd/1ddk_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ddk ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Beta-lactamase|Beta-lactamase]]
*[[Beta-lactamase 3D structures|Beta-lactamase 3D structures]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:010757977</ref><references group="xtra"/>
[[Category: Large Structures]]
[[Category: Beta-lactamase]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Abdel-Meguid, S S.]]
[[Category: Abdel-Meguid SS]]
[[Category: Bateson, J H.]]
[[Category: Bateson JH]]
[[Category: Cheever, C A.]]
[[Category: Cheever CA]]
[[Category: Clarke, B P.]]
[[Category: Clarke BP]]
[[Category: Concha, N O.]]
[[Category: Concha NO]]
[[Category: Frere, J M.]]
[[Category: Frere JM]]
[[Category: Galleni, M.]]
[[Category: Galleni M]]
[[Category: Janson, C A.]]
[[Category: Janson CA]]
[[Category: Lewis, C.]]
[[Category: Lewis C]]
[[Category: Payne, D J.]]
[[Category: Payne DJ]]
[[Category: Pearson, S.]]
[[Category: Pearson S]]
[[Category: Rowling, P.]]
[[Category: Rowling P]]
[[Category: Binuclear metal center]]
[[Category: Hydrolase]]
[[Category: Imp-1 metallo beta-lactamase]]
[[Category: Zn beta-lactamase]]