4edg: Difference between revisions

(4 intermediate revisions by the same user not shown)

Line 1:

~~[[Image:4edg.png|left|200px]]~~

~~{{STRUCTURE_4edg~~| ~~PDB~~=4edg | ~~SCENE~~= }}

==The structure of the S. aureus DnaG RNA Polymerase Domain bound to ATP and Manganese==

== Structural highlights ==

<table><tr><td colspan='2'>[[4edg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EDG OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=4EDG FirstGlance].

</td></tr><tr id='method'><td class="sblockLbl">[[Empirical_models|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.003Å</td></tr>

<tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=4edg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4edg OCA], [https://pdbe.org/4edg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4edg RCSB], [https://www.ebi.ac.uk/pdbsum/4edg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4edg ProSAT]</td></tr>

</table>

== Function ==

[https://www.uniprot.org/uniprot/DNAG_STAAU DNAG_STAAU] RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.[HAMAP-Rule:MF_00974]

==~~=The structure of the S. aureus DnaG RNA Polymerase Domain bound to ATP and Manganese===~~

==See Also==

*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]

~~{{ABSTRACT_PUBMED_22795082}}~~

__TOC__

</StructureSection>

~~==About this Structure~~==

[[Category: Large Structures]]

[[~~4edg~~]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EDG OCA].

~~==Reference==~~

<~~ref group="xtra"~~>~~PMID~~:~~022795082</ref><references group="xtra"/>~~

[[Category: Staphylococcus aureus]]

[[Category: Berger~~, J M.~~]]

[[Category: Berger JM]]

[[Category: Chu, C.]]

[[Category: Chu C]]

[[Category: Corn~~, J E.~~]]

[[Category: Corn JE]]

[[Category: Rymer~~, R U.~~]]

[[Category: Rymer RU]]

[[Category: Solorio~~, F A.~~]]

[[Category: Solorio FA]]

[[Category: Wang~~, J D.]]~~

[[Category: Wang JD]]

~~[[Category: Catalytic domain]]~~

~~[[Category: Nucleoside polyphosphate]]~~

~~[[Category: Nucleoside triphosphate]]~~

~~[[Category: Protein-ligand complex]]~~

~~[[Category: Transferase~~]]

Navigation menu

Page actions

Page actions

Personal tools

Navigation

Search

Tools

@@ Line 1: / Line 1: @@
-[[Image:4edg.png|left|200px]]
-{{STRUCTURE_4edg|  PDB=4edg  |  SCENE=  }}
+==The structure of the S. aureus DnaG RNA Polymerase Domain bound to ATP and Manganese==
+<StructureSection load='4edg' size='340' side='right'caption='[[4edg]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[4edg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EDG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4EDG FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.003&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4edg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4edg OCA], [https://pdbe.org/4edg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4edg RCSB], [https://www.ebi.ac.uk/pdbsum/4edg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4edg ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/DNAG_STAAU DNAG_STAAU] RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.[HAMAP-Rule:MF_00974]
-===The structure of the S. aureus DnaG RNA Polymerase Domain bound to ATP and Manganese===
+==See Also==
+*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]
-{{ABSTRACT_PUBMED_22795082}}
+__TOC__
+</StructureSection>
-==About this Structure==
+[[Category: Large Structures]]
-[[4edg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EDG OCA].
-==Reference==
-<ref group="xtra">PMID:022795082</ref><references group="xtra"/>
 [[Category: Staphylococcus aureus]]
-[[Category: Berger, J M.]]
+[[Category: Berger JM]]
-[[Category: Chu, C.]]
+[[Category: Chu C]]
-[[Category: Corn, J E.]]
+[[Category: Corn JE]]
-[[Category: Rymer, R U.]]
+[[Category: Rymer RU]]
-[[Category: Solorio, F A.]]
+[[Category: Solorio FA]]
-[[Category: Wang, J D.]]
+[[Category: Wang JD]]
-[[Category: Catalytic domain]]
-[[Category: Nucleoside polyphosphate]]
-[[Category: Nucleoside triphosphate]]
-[[Category: Protein-ligand complex]]
-[[Category: Transferase]]