4gd4: Difference between revisions

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New page: '''Unreleased structure''' The entry 4gd4 is ON HOLD Authors: King, O.N.F., Krojer, T., Arrowsmith C.H., Edwards A., Bountra C., McDonough, M.A., Schofield, C.J., Structural Genomics Co...
 
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'''Unreleased structure'''


The entry 4gd4 is ON HOLD
==Crystal Structure of JMJD2A Complexed with Inhibitor==
<StructureSection load='4gd4' size='340' side='right'caption='[[4gd4]], [[Resolution|resolution]] 2.33&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[4gd4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GD4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4GD4 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.33&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0WS:2-(1H-PYRAZOL-3-YL)PYRIDINE-4-CARBOXYLIC+ACID'>0WS</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4gd4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gd4 OCA], [https://pdbe.org/4gd4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4gd4 RCSB], [https://www.ebi.ac.uk/pdbsum/4gd4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4gd4 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/KDM4A_HUMAN KDM4A_HUMAN] Histone demethylase that specifically demethylates 'Lys-9' and 'Lys-36' residues of histone H3, thereby playing a central role in histone code. Does not demethylate histone H3 'Lys-4', H3 'Lys-27' nor H4 'Lys-20'. Demethylates trimethylated H3 'Lys-9' and H3 'Lys-36' residue, while it has no activity on mono- and dimethylated residues. Demethylation of Lys residue generates formaldehyde and succinate. Participates in transcriptional repression of ASCL2 and E2F-responsive promoters via the recruitment of histone deacetylases and NCOR1, respectively.<ref>PMID:16024779</ref> <ref>PMID:16603238</ref> <ref>PMID:21694756</ref>  Isoform 2: Crucial for muscle differentiation, promotes transcriptional activation of the Myog gene by directing the removal of repressive chromatin marks at its promoter. Lacks the N-terminal demethylase domain.<ref>PMID:16024779</ref> <ref>PMID:16603238</ref> <ref>PMID:21694756</ref>


Authors: King, O.N.F., Krojer, T., Arrowsmith C.H., Edwards A., Bountra C., McDonough, M.A., Schofield, C.J., Structural Genomics Consortium (SGC)
==See Also==
 
*[[Jumonji domain-containing protein 3D structures|Jumonji domain-containing protein 3D structures]]
Description: Crystal Structure of JMJD2A Complexed with Inhibitor
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Arrowsmith CH]]
[[Category: Bountra C]]
[[Category: Edwards A]]
[[Category: King ONF]]
[[Category: Krojer T]]
[[Category: McDonough MA]]
[[Category: Schofield CJ]]
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