4er8: Difference between revisions

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[[Image:4er8.png|left|200px]]


{{STRUCTURE_4er8|  PDB=4er8  |  SCENE=  }}
==Structure of the REP associates tyrosine transposase bound to a REP hairpin==
 
<StructureSection load='4er8' size='340' side='right'caption='[[4er8]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
===Structure of the REP associates tyrosine transposase bound to a REP hairpin===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[4er8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ER8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ER8 FirstGlance]. <br>
{{ABSTRACT_PUBMED_22885300}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4er8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4er8 OCA], [https://pdbe.org/4er8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4er8 RCSB], [https://www.ebi.ac.uk/pdbsum/4er8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4er8 ProSAT]</span></td></tr>
[[4er8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ER8 OCA].  
</table>
 
== Function ==
==Reference==
[https://www.uniprot.org/uniprot/RAYT_ECOLI RAYT_ECOLI] Transposase that is always flanked by repeated extragenic palindrome (REP) sequences, which are clustered in structures called bacterial interspersed mosaic elements (BIMEs). RayT catalyzes cleavage and recombination of BIMEs. Binds REP sequences and cleaves BIMEs both upstream and downstream of the REP sequence. Could be important in the creation of BIME variability and amplification.<ref>PMID:20085626</ref> <ref>PMID:22199259</ref> <ref>PMID:22885300</ref>
<ref group="xtra">PMID:022885300</ref><references group="xtra"/>
== References ==
[[Category: Escherichia coli]]
<references/>
[[Category: Chandler, M.]]
__TOC__
[[Category: Dyda, F.]]
</StructureSection>
[[Category: Ghirlando, R.]]
[[Category: Escherichia coli K-12]]
[[Category: Hickman, A B.]]
[[Category: Large Structures]]
[[Category: Messing, S A.J.]]
[[Category: Chandler M]]
[[Category: Ton-Hoang, B.]]
[[Category: Dyda F]]
[[Category: Catalytic tyrosine]]
[[Category: Ghirlando R]]
[[Category: Dna binding protein-dna complex]]
[[Category: Hickman AB]]
[[Category: Guide sequence]]
[[Category: Messing SAJ]]
[[Category: Huh motif]]
[[Category: Ton-Hoang B]]
[[Category: Protein-dna complex]]
[[Category: Rna recognition motif]]
[[Category: Transposase]]

Latest revision as of 11:05, 1 March 2024

Structure of the REP associates tyrosine transposase bound to a REP hairpin

4er8, resolution 2.60Å

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