1dnv: Difference between revisions

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[[Image:1dnv.png|left|200px]]


{{STRUCTURE_1dnv|  PDB=1dnv  |  SCENE=  }}
==PARVOVIRUS (DENSOVIRUS) FROM GALLERIA MELLONELLA==
 
<StructureSection load='1dnv' size='340' side='right'caption='[[1dnv]], [[Resolution|resolution]] 3.60&Aring;' scene=''>
===PARVOVIRUS (DENSOVIRUS) FROM GALLERIA MELLONELLA===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1dnv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Galleria_mellonella_densovirus Galleria mellonella densovirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DNV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DNV FirstGlance]. <br>
{{ABSTRACT_PUBMED_9817847}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.6&#8491;</td></tr>
 
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dnv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dnv OCA], [https://pdbe.org/1dnv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dnv RCSB], [https://www.ebi.ac.uk/pdbsum/1dnv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dnv ProSAT]</span></td></tr>
==About this Structure==
</table>
[[1dnv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Galleria_mellonella_densovirus Galleria mellonella densovirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DNV OCA].  
== Function ==
[https://www.uniprot.org/uniprot/CAPSD_GMDNV CAPSD_GMDNV] Capsid protein self-assembles to form an icosahedral capsid with a T=1 symmetry, about 22 nm in diameter, and consisting of 60 copies of size variants of the capsid proteins, which differ in the N-terminushe capsid encapsulates the genomic ssDNA. Capsid proteins are responsible for the attachment to host cell receptors. This attachment induces virion internalization predominantly through clathrin-dependent endocytosis (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dn/1dnv_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dnv ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Virus coat protein|Virus coat protein]]
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:009817847</ref><references group="xtra"/>
[[Category: Galleria mellonella densovirus]]
[[Category: Galleria mellonella densovirus]]
[[Category: Baker, T S.]]
[[Category: Large Structures]]
[[Category: Chipmann, P R.]]
[[Category: Baker TS]]
[[Category: Rossmann, M G.]]
[[Category: Chipmann PR]]
[[Category: Simpson, A A.]]
[[Category: Rossmann MG]]
[[Category: Tijssen, P.]]
[[Category: Simpson AA]]
[[Category: Capsid protein]]
[[Category: Tijssen P]]
[[Category: Densovirus]]
[[Category: Icosahedral virus]]
[[Category: Parvovirus]]
[[Category: Viral capsid]]
[[Category: Virus]]
Retrieved from "https://proteopedia.org/1dnv"