3pmn: Difference between revisions

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[[Image:3pmn.png|left|200px]]


{{STRUCTURE_3pmn|  PDB=3pmn  |  SCENE=  }}
==ternary crystal structure of polymerase lambda variant with a GT mispair at the primer terminus with Mn2+ in the active site==
 
<StructureSection load='3pmn' size='340' side='right'caption='[[3pmn]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
===ternary crystal structure of polymerase lambda variant with a GT mispair at the primer terminus with Mn2+ in the active site===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3pmn]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PMN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PMN FirstGlance]. <br>
{{ABSTRACT_PUBMED_21233421}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1GC:2-DEOXY-5-O-[(R)-HYDROXY{[(S)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]METHYL}PHOSPHORYL]GUANOSINE'>1GC</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pmn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pmn OCA], [https://pdbe.org/3pmn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pmn RCSB], [https://www.ebi.ac.uk/pdbsum/3pmn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pmn ProSAT]</span></td></tr>
[[3pmn]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PMN OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/DPOLL_HUMAN DPOLL_HUMAN] Repair polymerase. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Has both DNA polymerase and terminal transferase activities. Has a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.<ref>PMID:11457865</ref> <ref>PMID:15537631</ref>


==See Also==
==See Also==
*[[DNA polymerase|DNA polymerase]]
*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
 
== References ==
==Reference==
<references/>
<ref group="xtra">PMID:021233421</ref><references group="xtra"/>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Bebenek, K.]]
[[Category: Large Structures]]
[[Category: Kunkel, T A.]]
[[Category: Bebenek K]]
[[Category: Pedersen, L C.]]
[[Category: Kunkel TA]]
[[Category: Dna]]
[[Category: Pedersen LC]]
[[Category: Lyase]]
[[Category: Protein-dna complex]]
[[Category: Transferase]]
[[Category: Transferase-dna complex]]
Retrieved from "https://proteopedia.org/3pmn"